| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1262 |
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| Symbol | |
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| ID | 5322109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1355444 |
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| End bp | 1356709 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640790203 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001326947 |
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| Protein GI | 150396480 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0631224 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGACC AGAAATTTGT GAAGCGCGGT CTTTTCCTCG TCTTTATGAT CCTCTTCCTC
GATATTATGG GTATCGCCAT CATTGTCCCT GTATTGCCGA GCTATCTCGA GGAATTGACG
GGGGCGGATG TTGGTGAAGC GGCAATCGAC GGCGGCTGGC TGCTGCTCGT TTATTCGGCG
ATGCAGTTCT TCTTCGCGCC GCTCATCGGG AATCTGAGCG ACCGATTCGG GCGCCGGCCG
ATCCTTTTGG CCTCCGTGCT GACCTTCGCT ATCGACAACC TGATCTGCGC GCTTGCGACG
AGCTACTGGA TGCTTTTCAT CGGGCGCAGC CTTGCCGGGA TCAGCGGCGC GAGTTTCGGC
ACCGCGTCCG CTTACATCGC CGATGTCAGC AATGACGAAA ACCGCGCCAA GAACTTCGGG
CTGATCGGCA TTGCCTTCGG AACCGGTTTT GCACTGGGCC CGGTCATAGG AGGTGTCCTT
GGGGAACTGG GACCAAGGGT GCCCTTTTAT GGTGCCGCAG CGCTGTCGTT CCTCAATTTC
GTCATGGGTG CCTTTCTCCT GCCGGAAACG CTCGATCCGG CCAATCGGCG TCGCTTCGAA
TGGCGCCGGG CCAATCCGTT CGGCGCGCTC AAGCAGATGC GTCATTACCC GGGTATCGGC
TGGGTGGGCC TCGTCTTCTT CCTCTACTGG CTGGCGCACG CCGTCTACCC CGCCGTCTGG
TCCTTCGTCG CTTCCTATCG CTATGGGTGG AGCGAAGGGC AGATCGGGCT TTCATTGGGG
ATTTTCGGCG TCGGCGGCGC AATCGTCATG GCGCTGGTAC TGCCGCGCGT CGTCCCGGCA
TTGGGAGAAA GGCGAACGGC CGCGCTCGGG CTTACATTCA CGGCTCTCGG AATGGCCGGC
TATGCTGCTG CCTGGGAAGG CTGGATGGTA TATGCTGTGA TCGTCGCGAC CGCGCTTGAA
AGCCTTGCCG ATCCGCCGCT CCGCAGCATA GCGTCGGTCC ATGTCCCGCC CTCCGCACAG
GGCGAATTGC AAGGCGCGCT CACCAGTATA TCGAGCATGA CGACGATCAT CGGACCTCTG
ATGTTTACGC AGATTTTTGC CTATTTCACT AACCCCGCCG CCACCTATGC CTTTTCCGGG
GCTCCCTATG CGGTGGCCGG CTGCCTGATC ATCGCCGCAT TGCTGATATT CCTTGCCAAG
GTCCGCACCG GACGGGGTGG CACCTATCGG GATGGGGTGC CCGGCATAGC GGAGGCATCA
TCCTGA
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| Protein sequence | MIDQKFVKRG LFLVFMILFL DIMGIAIIVP VLPSYLEELT GADVGEAAID GGWLLLVYSA
MQFFFAPLIG NLSDRFGRRP ILLASVLTFA IDNLICALAT SYWMLFIGRS LAGISGASFG
TASAYIADVS NDENRAKNFG LIGIAFGTGF ALGPVIGGVL GELGPRVPFY GAAALSFLNF
VMGAFLLPET LDPANRRRFE WRRANPFGAL KQMRHYPGIG WVGLVFFLYW LAHAVYPAVW
SFVASYRYGW SEGQIGLSLG IFGVGGAIVM ALVLPRVVPA LGERRTAALG LTFTALGMAG
YAAAWEGWMV YAVIVATALE SLADPPLRSI ASVHVPPSAQ GELQGALTSI SSMTTIIGPL
MFTQIFAYFT NPAATYAFSG APYAVAGCLI IAALLIFLAK VRTGRGGTYR DGVPGIAEAS
S
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