Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1248 |
Symbol | |
ID | 5322095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1338665 |
End bp | 1339639 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640790189 |
Product | thioredoxin reductase |
Protein accession | YP_001326933 |
Protein GI | 150396466 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0492] Thioredoxin reductase |
TIGRFAM ID | [TIGR01292] thioredoxin-disulfide reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.335568 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCGC GCCACACGAA AGTGCTGATT ATCGGTTCCG GCCCTGCCGG TTATACCGCC GCCATCTACA CGGCGCGGGC CATGCTTTCG CCGGTGCTTA TCGCCGGCAT GGAACAAGGC GGCCAGCTGA TGATCACCAC CGACGTGGAG AATTATCCCG GCTATGCCGA TCCGGTCCAA GGCCCCTGGA TGATGGAGCA GATGCTGAAA CAGGCGATCC ATGTCGGCAC GGAGATCGTC AACGATCTCG TAACCGACGT CGACCTCTCC GTCCGCCCCT TCCGCATAAG AACGGATAGC GGCACGGATT GGACGGCAGA CGCGTTGATC ATAGCCACCG GCGCCAAAGC GAAGTGGCTC GGCATCGAAA CGGAACCGAC CTTCATGGGT TTCGGCGTAT CCGCCTGTGC CACCTGCGAC GGGTTTTTCT ACCGCAACAA GGATGTCATC GTCGTGGGCG GAGGCAACTC GGCGGTGGAG GAAGCACTGT ATCTCTCCAA CCTGGCCAAG ACGGTGACCG TGGTTCACCG GCGCGACGCT TTTCGCGCGG AGAAGATTTT GCAGGAGCGC CTGTTCTCGA AGCCGAACGT CAAGGTGATC TGGGATCACG AGGTTCTGGA ATATCTCGGG ACGCCGGCAA AGCCCCCGAT GCCGGCCTCG GTAAACGGTG TAAAGCTTCG TAACACCAAG ACCGGCGAAA CATCGGAAAT GGTCATCGAC GGGGTTTTCG TGGCGATCGG TCATGCGCCC GCCGTCGAGC TCTTCAAGGG TAAACTTCGC CAGAAGCCCA ACGGCTATCT CTGGACCGCG CCGGATTCGA CGGCGACCGA TGTGCCCGGC GTCTTCGCCG CCGGCGACGT CACCGACGAT ATCTATCGTC AGGCCGTTAC AGCGGCCGGC ATGGGTTGCA TGGCGGCGCT TGAAGCGGAG AAATATCTGG CGGGTCATAT GCCCGTCGCA ATCGCAGCCG AATAG
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Protein sequence | MTARHTKVLI IGSGPAGYTA AIYTARAMLS PVLIAGMEQG GQLMITTDVE NYPGYADPVQ GPWMMEQMLK QAIHVGTEIV NDLVTDVDLS VRPFRIRTDS GTDWTADALI IATGAKAKWL GIETEPTFMG FGVSACATCD GFFYRNKDVI VVGGGNSAVE EALYLSNLAK TVTVVHRRDA FRAEKILQER LFSKPNVKVI WDHEVLEYLG TPAKPPMPAS VNGVKLRNTK TGETSEMVID GVFVAIGHAP AVELFKGKLR QKPNGYLWTA PDSTATDVPG VFAAGDVTDD IYRQAVTAAG MGCMAALEAE KYLAGHMPVA IAAE
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