Gene Smed_1244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1244 
Symbol 
ID5322091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1334560 
End bp1335378 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content63% 
IMG OID640790185 
Productaminoglycoside/hydroxyurea antibiotic resistance kinase 
Protein accessionYP_001326929 
Protein GI150396462 
COG category[V] Defense mechanisms 
COG ID[COG3570] Streptomycin 6-kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.761762 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.361729 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATCG ATTATGCTGC ACGGATGTTC ACATCCTTCA TTGATAAATG GGCTCTCGAC 
CCCGCCGGTG AGCCCATCCT CACGCGGACG AGCCGCCTGC TGCCCGTTCG TTGGCGTGGC
TTGCCGGCCA TGCTCAAGGT GGCAGACGAG CCGGAGGAGA TATCCGGTGG GCGGTTGATG
AAATGGTGGG ATGGCCACGG TGCCGCAAGG GTTTACGCCG CAACCGACAA CGCGATCCTT
ATCGAGCGAT CTGACAGCCG ACGATCGCTT TTTCACATGG CGATGACCGG CAGCGACGAT
GCCGTGACCC GGATCATCTG CAGGACGGTT GCCTCGCTGC ATGCACCACG TCCATCGCCG
CCGGCGGGTT TAGCACCGCT CGAACGCTGG TTCCAGGCGC TTGCCCCCGC AGCCCGCATC
CACGGGGGCG TTCTCGGGAC CTGCGCGGAT GCTGCGCGGT TTCTCTTTTC CGCTCCCGGT
GCGCCGGTCG TCCTGCATGG CGACATTCAC CACGGCAATA TTCTCGATTT CGATGACCGG
GGCTGGCTCG CCATCGATCC GAAAGGGCTC CTCGGCGAAC GCGGTTTCGA TTACGCCAAT
CTCTTCTGCA ATCCGGAGCT TCCGCTCGGA ACTTTTCCAG GGCGTCTGCA TGGGCAGCTT
GCGGTCGTCG CCCATGAGGC GCGCCTTGAG CCGAGGAGGC TCCTGCATTG GATAGTCGCC
TATGCCGGCC TGTCCGCCGC CTGGTTTCTT GGTGACGGCG AAAACCCAGA GAGCACTTTG
ACCATCGCCG AGATTGCCGC CGCGGAGCTG CACGGCTAG
 
Protein sequence
MRIDYAARMF TSFIDKWALD PAGEPILTRT SRLLPVRWRG LPAMLKVADE PEEISGGRLM 
KWWDGHGAAR VYAATDNAIL IERSDSRRSL FHMAMTGSDD AVTRIICRTV ASLHAPRPSP
PAGLAPLERW FQALAPAARI HGGVLGTCAD AARFLFSAPG APVVLHGDIH HGNILDFDDR
GWLAIDPKGL LGERGFDYAN LFCNPELPLG TFPGRLHGQL AVVAHEARLE PRRLLHWIVA
YAGLSAAWFL GDGENPESTL TIAEIAAAEL HG