| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1154 |
|---|
| Symbol | |
|---|
| ID | 5322000 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | - |
|---|
| Start bp | 1228596 |
|---|
| End bp | 1229387 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640790095 |
|---|
| Product | exodeoxyribonuclease III Xth |
|---|
| Protein accession | YP_001326840 |
|---|
| Protein GI | 150396373 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0708] Exonuclease III |
|---|
| TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.311062 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATTG CCACATGGAA CATCAACGGC GTCAAGGCGC GTCTCGACGG CCTCGTGGGC
TGGCTAAAGG AATCAAATCC CGACATCGCC TGTCTGCAGG AGATCAAGTC CATTGACGAC
GCATTTCCGA GAGGTGAGAT CGAGTCGCTC GGCTATCATG TCGAAACGCA CGGTCAGAAG
GGATTCAATG GCGTTGCGCT GCTTTCCAAG CTGCGACCGG ACGAGGTCAA TCGCGGATTG
CCGGGGGACG CTTCCGACGA ACAGTCACGC TTTATCGAAG GCGTGTTCTC GGTCAACGGC
GGTGCGCTAC GCGTCTGCTG CCTCTATTTG CCGAACGGAA ATCCGGTAGA GACGGAAAAA
TACCCCTACA AGCTTGCATG GATGCGGCGC CTCGCCGCCT TTGCGGAACA AAGGCTCATG
CTCGAGGAAC CACTCATCCT CGCCGGTGAC TACAATGTCA TTCCGGAGCC TCATGACTGC
TGGGACGTCA AGGTCTGGCG TAACGACGCC CTGTACCTGC CCGAGACCCG CGCCGCCTTC
CGCCGTCTGC GCAATCTTGG TTTCACCGAC GCCGTGCGCG CGACCTCCGA CGAGGCGCCG
CTCTATTCGT TCTGGGATTA TCAGGCCGGC TGCTGGCCGA AGAATCTCGG CATCCGCATC
GACCACCTGA TGCTGTCGCC GGAGGCGGCC GACAAGCTCG TGTCGACCTC TATCGAGAAG
CACGTCCGAT CCTGGGAAAA GCCGTCCGAC CACGTACCTG TGACGGCTGA ATTCGCATTC
GAGATCGCTT AG
|
|---|
| Protein sequence | MKIATWNING VKARLDGLVG WLKESNPDIA CLQEIKSIDD AFPRGEIESL GYHVETHGQK
GFNGVALLSK LRPDEVNRGL PGDASDEQSR FIEGVFSVNG GALRVCCLYL PNGNPVETEK
YPYKLAWMRR LAAFAEQRLM LEEPLILAGD YNVIPEPHDC WDVKVWRNDA LYLPETRAAF
RRLRNLGFTD AVRATSDEAP LYSFWDYQAG CWPKNLGIRI DHLMLSPEAA DKLVSTSIEK
HVRSWEKPSD HVPVTAEFAF EIA
|
|---|
| |