| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1147 |
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| Symbol | |
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| ID | 5321993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1218412 |
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| End bp | 1218837 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640790088 |
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| Product | TonB system transport protein ExbD type-1 |
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| Protein accession | YP_001326833 |
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| Protein GI | 150396366 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | [TIGR02803] TonB system transport protein ExbD, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.103894 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGGAA AAACATCCGA AGGCAGCGGC GATCTCGACG AGAACAGCGA GATCAACGTT
ACCCCTTTCA TCGACGTCAT GCTCGTGCTC CTCATCATCT TCATGGTGGC TGCGCCGCTG
GCGACCGTCG ACATGAAGGT CGATCTGCCG CAATCGGTGG CAAAACCCGC GCCGCGTGAC
GACAAACCGG TCTTCGTCAC CCTGAAGGCC GATCTCACGC TTGCCGTCGG CAATGAAGAG
GCCCCTCGCG AGGCCTTTGT GTCGGAGTTG AACCGGACAA CCGGCGGCAA TACGGAGACG
CGCGTGCTCC TGCGCGCCGA TCGGCTGGTC GACTATGGAG AACTGATGAC GGTGATGAAC
CTCATTCAGA ATGCCGGCTA CGCCAAGATC GCACTCGTCG GTCTGGAAGC AGCGCCCGCC
CGCTAG
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| Protein sequence | MAGKTSEGSG DLDENSEINV TPFIDVMLVL LIIFMVAAPL ATVDMKVDLP QSVAKPAPRD
DKPVFVTLKA DLTLAVGNEE APREAFVSEL NRTTGGNTET RVLLRADRLV DYGELMTVMN
LIQNAGYAKI ALVGLEAAPA R
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