Gene Smed_1142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1142 
Symbol 
ID5321988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1210936 
End bp1211823 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content65% 
IMG OID640790083 
Producthypothetical protein 
Protein accessionYP_001326828 
Protein GI150396361 
COG category[S] Function unknown 
COG ID[COG3494] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0304239 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGTGG CGATTCATCG CCTGCCGCAG TCAAAAGGCA GGCTCGCCAT CATTGCCGGT 
GCCGGTGCAC TTCCCCATCA TGTCGCCGAG GCGGCACGCC GTCAGGGGGA AAACCCGTTC
ATAATTGCGC TGTCGCGGGA GGCCGATGCC GATTGGACCG GCTTCGACCA TACGGTTTGC
GCAATCGGGG ACTTTGCCGC AATCAGCCAC ACCTTCGAGG CCGAGAAGAT CGATCGAGTG
GTCCTTTCGG GTGCAGTGCG ACGGCGTCCG GAGTGGCGCG ATATTCGTCC TACATTGAAG
ACGCTGGCCA AGGTGCCGCG CGTTTTCCGC ACCCTGATGT CCGGTGGTGA CGATGCGGTC
CTGCGCATGG TGATCGAGCT GATCGAGGCG AGCGGCGCAC ATGTGATCGG TGCGCACGAA
GTCGTTCCTG GGCTTCTTGC GGATGTCGGT CCGCTTGGCA GGCACGCACC CACGGACGAG
GACCAGCGCG ACATCCGGGC AGGCATTGCC GCGGCAAATG CACTGGGTGC GCTCGACGTC
GGCCAGGGTG CCGTCGCCGT CGGCGGCAGG GTTGTGGCGC TTGAAGGCGC GGAAGGAACG
GACGCCATGT TGGCGAGAGT TTCCGACCTC AGGAAAGACG GGCGAATATC CGTCCGCCGC
CGCGGTGTTC TCGTGAAGCT CTGCAAACCG CAACAGGACG AGCGGGCGGA CCTGCCTTCG
ATCGGTCCGT CAACCGTTGC AGAAGCGCAT GCAGCCGGCC TCGCGGGCAT TGCCATCGAG
GCGGGGCGCG CGCTGGTTCT GGAGCGGACA CGCCTTGTGG AGGCGGCCGA CAGGAGCGGT
ATGTTTGTAC TGGGTATCGA GCGCAATCTC CGCAGGGAGC GGGAATGA
 
Protein sequence
MSVAIHRLPQ SKGRLAIIAG AGALPHHVAE AARRQGENPF IIALSREADA DWTGFDHTVC 
AIGDFAAISH TFEAEKIDRV VLSGAVRRRP EWRDIRPTLK TLAKVPRVFR TLMSGGDDAV
LRMVIELIEA SGAHVIGAHE VVPGLLADVG PLGRHAPTDE DQRDIRAGIA AANALGALDV
GQGAVAVGGR VVALEGAEGT DAMLARVSDL RKDGRISVRR RGVLVKLCKP QQDERADLPS
IGPSTVAEAH AAGLAGIAIE AGRALVLERT RLVEAADRSG MFVLGIERNL RRERE