Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1142 |
Symbol | |
ID | 5321988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 1210936 |
End bp | 1211823 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640790083 |
Product | hypothetical protein |
Protein accession | YP_001326828 |
Protein GI | 150396361 |
COG category | [S] Function unknown |
COG ID | [COG3494] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0304239 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGTGG CGATTCATCG CCTGCCGCAG TCAAAAGGCA GGCTCGCCAT CATTGCCGGT GCCGGTGCAC TTCCCCATCA TGTCGCCGAG GCGGCACGCC GTCAGGGGGA AAACCCGTTC ATAATTGCGC TGTCGCGGGA GGCCGATGCC GATTGGACCG GCTTCGACCA TACGGTTTGC GCAATCGGGG ACTTTGCCGC AATCAGCCAC ACCTTCGAGG CCGAGAAGAT CGATCGAGTG GTCCTTTCGG GTGCAGTGCG ACGGCGTCCG GAGTGGCGCG ATATTCGTCC TACATTGAAG ACGCTGGCCA AGGTGCCGCG CGTTTTCCGC ACCCTGATGT CCGGTGGTGA CGATGCGGTC CTGCGCATGG TGATCGAGCT GATCGAGGCG AGCGGCGCAC ATGTGATCGG TGCGCACGAA GTCGTTCCTG GGCTTCTTGC GGATGTCGGT CCGCTTGGCA GGCACGCACC CACGGACGAG GACCAGCGCG ACATCCGGGC AGGCATTGCC GCGGCAAATG CACTGGGTGC GCTCGACGTC GGCCAGGGTG CCGTCGCCGT CGGCGGCAGG GTTGTGGCGC TTGAAGGCGC GGAAGGAACG GACGCCATGT TGGCGAGAGT TTCCGACCTC AGGAAAGACG GGCGAATATC CGTCCGCCGC CGCGGTGTTC TCGTGAAGCT CTGCAAACCG CAACAGGACG AGCGGGCGGA CCTGCCTTCG ATCGGTCCGT CAACCGTTGC AGAAGCGCAT GCAGCCGGCC TCGCGGGCAT TGCCATCGAG GCGGGGCGCG CGCTGGTTCT GGAGCGGACA CGCCTTGTGG AGGCGGCCGA CAGGAGCGGT ATGTTTGTAC TGGGTATCGA GCGCAATCTC CGCAGGGAGC GGGAATGA
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Protein sequence | MSVAIHRLPQ SKGRLAIIAG AGALPHHVAE AARRQGENPF IIALSREADA DWTGFDHTVC AIGDFAAISH TFEAEKIDRV VLSGAVRRRP EWRDIRPTLK TLAKVPRVFR TLMSGGDDAV LRMVIELIEA SGAHVIGAHE VVPGLLADVG PLGRHAPTDE DQRDIRAGIA AANALGALDV GQGAVAVGGR VVALEGAEGT DAMLARVSDL RKDGRISVRR RGVLVKLCKP QQDERADLPS IGPSTVAEAH AAGLAGIAIE AGRALVLERT RLVEAADRSG MFVLGIERNL RRERE
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