| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1140 |
|---|
| Symbol | fabZ |
|---|
| ID | 5321986 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 1209657 |
|---|
| End bp | 1210121 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640790081 |
|---|
| Product | (3R)-hydroxymyristoyl-ACP dehydratase |
|---|
| Protein accession | YP_001326826 |
|---|
| Protein GI | 150396359 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases |
|---|
| TIGRFAM ID | [TIGR01750] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0252282 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.882525 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGAAG CTGCAACGGT CCTCGGAACC GCGGACATAC AGGAAATCCT GAAGCTTCTT
CCCCATCGTT ATCCCTTCTT GCTCGTGGAT CGCATCATCG AGATCGATAG CGACAATTCG
GCCATCGGGA TCAAGAACGT GACGGCCAAT GAGCCGCATT TCACGGGCCA CTTCCCCGAG
AAGCCGATCA TGCCGGGCGT CCTTTTGATC GAAGGCATGG CGCAGACGGC CGGCGCGATC
TGTGCCCGCA AGACGGGGGG CGGAAGCAAT CTCGTATATT TCATGACGAT CGACAACGCC
CGCTTCCGCA AGCCCGTCGT ACCGGGAGAC CGGGTAGAAT TTCATGTCGT AAAGCAAAAG
CAGCGCGGCA ATATCTGGAA GTTTCACTGT GATGCAAAAG TTGACGGGCA ACTCGTCGCC
GAAGCTGATA TCGGCGCGAT GATTGTCAGC AAGGAAGACG TCTGA
|
|---|
| Protein sequence | MNEAATVLGT ADIQEILKLL PHRYPFLLVD RIIEIDSDNS AIGIKNVTAN EPHFTGHFPE
KPIMPGVLLI EGMAQTAGAI CARKTGGGSN LVYFMTIDNA RFRKPVVPGD RVEFHVVKQK
QRGNIWKFHC DAKVDGQLVA EADIGAMIVS KEDV
|
|---|
| |