Gene Smed_1132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1132 
Symboltsf 
ID5321978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1200665 
End bp1201588 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content62% 
IMG OID640790073 
Productelongation factor Ts 
Protein accessionYP_001326818 
Protein GI150396351 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0264] Translation elongation factor Ts 
TIGRFAM ID[TIGR00116] translation elongation factor Ts 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTTA CCGCCGCAAT GGTGAAGGAG CTGCGCGAAA AGACCGGCGC AGGCATGATG 
GACTGCAAGA AGGCGCTTGC CGAAACCAAT GGCGACATGG AAGCCGCCAT CGACTGGCTG
CGCGCCAAGG GCATCGCCAA GGCTGACAAG AAGTCCGGCC GCACTGCCGC AGAAGGCCTC
ATCGGCATTG CCAGCGCAGG CGCCAAGGCC GTCGTCGTCG AAATCAACTC CGAAACCGAC
TTCGTTGCCC GCAACGATGC CTTCCAGGAG CTCGTCCGCG GCGTCGCCAA TGTTGCGCTC
GGTACGGACG GCAGCGTCGC AGCGGTCTCA AAGGCGACCT ATCCGGCCAC CGGCAAGTCC
GTCGAAGATA CGATCAAGGA TGCTATCGCC ACCATCGGCG AGAACATGAC GCTGCGCCGC
TCGGCAATGC TCGAGGTCGA GGACGGCGTC GTCGCGACCT ATGTGCACAA TGCCGCAGGC
GAGGGTATCG GCAAGCTCGG CGTGCTCGTT GCGTTGAAGT CCTCCGGCGA CAAGGAAGCC
CTGAACGCGA TCGGCCGCCA GGTTGCAATG CACGTGGCCG CGACCAACCC GCTCGCCGTC
CGTTCGAGCG AAATCGACCC TGCGGTCGCC GAACGCGAGC GCAACGTGTT CATCGAGCAG
TCGCGCGCTT CCGGCAAGCC GGACAATATC ATCGAGAAGA TGGTCGATGG CCGCATGCGC
AAGTTCTTCG AGGAAGTTGC CCTTCTCTCG CAGGCTTTCG TCATGAATCC TGATCAGACG
GTGGAAGCGG CGATCAAGGA AGCGGAAAAA TCCGTTGGTG CGCCCATCGA AGTCGCTGGC
ATTGCCCGTT TGCTGCTCGG CGAAGGTGTC GAAAAGGAAG AAAGCGATTT CGCGGCTGAA
GTGGCAGCTG CCGCGAAGGG TTGA
 
Protein sequence
MTVTAAMVKE LREKTGAGMM DCKKALAETN GDMEAAIDWL RAKGIAKADK KSGRTAAEGL 
IGIASAGAKA VVVEINSETD FVARNDAFQE LVRGVANVAL GTDGSVAAVS KATYPATGKS
VEDTIKDAIA TIGENMTLRR SAMLEVEDGV VATYVHNAAG EGIGKLGVLV ALKSSGDKEA
LNAIGRQVAM HVAATNPLAV RSSEIDPAVA ERERNVFIEQ SRASGKPDNI IEKMVDGRMR
KFFEEVALLS QAFVMNPDQT VEAAIKEAEK SVGAPIEVAG IARLLLGEGV EKEESDFAAE
VAAAAKG