| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1095 |
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| Symbol | hfq |
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| ID | 5321941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1165507 |
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| End bp | 1165749 |
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| Gene Length | 243 bp |
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| Protein Length | 80 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640790036 |
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| Product | RNA-binding protein Hfq |
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| Protein accession | YP_001326781 |
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| Protein GI | 150396314 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1923] Uncharacterized host factor I protein |
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| TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.455176 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGAAC GTTCTCAAAA CTTGCAGGAT CTATTTCTCA ACACGGTCCG CAAGCAAAAG
ATTTCTTTGA CCATTTTCCT CATCAATGGC GTGAAGCTGA CGGGTGTCGT AACATCGTTT
GACAATTTCT GTGTACTGCT TCGCCGCGAC GGCCATTCTC AGCTCGTCTA CAAGCACGCC
ATCTCGACGA TCATGCCGGG CCAGCCGCTG CAGATGTTCG AGAATGAGGA AGCTGCCTCC
TGA
|
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| Protein sequence | MAERSQNLQD LFLNTVRKQK ISLTIFLING VKLTGVVTSF DNFCVLLRRD GHSQLVYKHA
ISTIMPGQPL QMFENEEAAS
|
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| |