| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1092 |
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| Symbol | |
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| ID | 5321938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1161724 |
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| End bp | 1163088 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640790033 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001326778 |
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| Protein GI | 150396311 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.452222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGCTG ATATTCTGGT TGTAGATGAC GAGGAGGACA TTCGCGAGAT CGTCTCGGGA
ATCCTCTCTG ACGAAGGCCA TGAGACGCGC ACCGCCTTCG ACAGCGAGAG TGCGCTTGCG
GCGATCAACG ACCGCCTGCC GCGTCTGATC TTCCTCGACA TCTGGATGCA GGGGAGCAAG
CTCGACGGAC TGGCGCTCCT GGACGAGATC AAGAGCCGCC ACCCCGATTT GCCGGTGGTG
ATGATTTCAG GCCACGGCAA CATCGAAACG GCCGTTTCGG CGATCAAGCG CGGCGCCTAT
GACTTCATCG AGAAACCGTT CAAGGCCGAC CGGCTGATCC TTATCGCCGA GCGCGCGCTC
GAAAATTCCA AGCTCAAGCG CGAAAACTTC GAATTGAAGA GGAAGTCGGG CGATCCGGTG
GAACTCATCG GAACCTCCGT CGCGGTCTCG CAGCTGCGCC AGATGATCGA GAAGGTGGCG
CCGACCAATA GCCGCATCAT GATTCAGGGA CCGTCCGGCT CCGGCAAGGA ACTCGTTGCG
CGGATGATTC ATCGCAAATC CGCACGCGCC AACGGTCCTT TTGTCGCCCT CAATGCGGCT
GCGATCACGC CGGACAAAAT GGAGATCGCG CTGTTCGGCA CCGAGGGTAC GACCGGACAA
CCGCGCCGGA CCGGAGCGCT CGAGGAAGCT CATGGCGGTA TTCTTTACCT CGATGAAGTC
GGCGAAATGC CACGCGAGAC GCAGAACAAG ATCCTGCGCG TCCTCGTCGA TCAGCAGTTC
GAGCGGGTAG GCGGGTCCAA GCGCGTCAAG GTCGATGTCC GCATCATCTC CTCGACCGCC
TACAATCTCG AGAACATGAT CGCCGAGGGC CTGTTCCGCG AGGATCTCTA CCACCGGCTC
GCCGTTATTC CGGTGCGCGT TCCTGCTCTT GCGGAGCGCC GCGAGGATAT TCCTTTCCTG
GTCGACATGT TCATGCGCCA GGTCAGCGAG CAGGCCGGCA TCCGACCCCG CAAGATAGGC
GAGGATGCGC TCGCCGTACT GCAGGCGCAT GACTGGCCCG GCAATATCCG GCAGTTGCGC
AACAATATCG AGCGCCTGAT GATCCTGGCG CGTAGCGACG GTCCGGACAC GCCGATCACC
GCCGACATGC TGCCGAACGA GGTTGGAGAC ACCCTGCCGA AGATTTCGGC GCAAAGCGAT
CAGCACATCA TGACCCTGCC GCTGAGGGAG GCGCGCGAGA TGTTCGAGCG CGACTATCTG
ATCGCCCAGA TCAACCGCTT CGGCGGCAAC ATCTCGCGCA CAGCCGAATT CGTCGGCATG
GAACGCTCCG CTCTTCATCG CAAGCTGAAG TCGCTCGGCG TGTGA
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| Protein sequence | MAADILVVDD EEDIREIVSG ILSDEGHETR TAFDSESALA AINDRLPRLI FLDIWMQGSK
LDGLALLDEI KSRHPDLPVV MISGHGNIET AVSAIKRGAY DFIEKPFKAD RLILIAERAL
ENSKLKRENF ELKRKSGDPV ELIGTSVAVS QLRQMIEKVA PTNSRIMIQG PSGSGKELVA
RMIHRKSARA NGPFVALNAA AITPDKMEIA LFGTEGTTGQ PRRTGALEEA HGGILYLDEV
GEMPRETQNK ILRVLVDQQF ERVGGSKRVK VDVRIISSTA YNLENMIAEG LFREDLYHRL
AVIPVRVPAL AERREDIPFL VDMFMRQVSE QAGIRPRKIG EDALAVLQAH DWPGNIRQLR
NNIERLMILA RSDGPDTPIT ADMLPNEVGD TLPKISAQSD QHIMTLPLRE AREMFERDYL
IAQINRFGGN ISRTAEFVGM ERSALHRKLK SLGV
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