Gene Smed_1056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1056 
Symbol 
ID5321902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1124754 
End bp1125341 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content62% 
IMG OID640789999 
Productnitroreductase 
Protein accessionYP_001326744 
Protein GI150396277 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.545888 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCG AAATAAAGCT TGTCGATTAT CTTGCATGCC GCAGATCCAT TCCAGCCTTC 
CAGATGGGCG AGCCGGGACC GGGCAGGGCA GAGGTCGAGG AGATGCTGAA GCTGGCGTCA
CGCGCCCCCG ATCACGGCAA ACTGGCTCCG TGGCGCTTCA TCGTCTATCG GGGCGAGGAA
AGGGCGCGCA TCAGCGCCGA ACTGAAGAAA ATGGCCCTTG CCGCCAAGCC GGACATGCCG
GACGAGATGA TCAAGGTCGA GGAGACCCGG CTTACGCGCG CACCCGTCGT CGTCGCCGTG
GTCAGCAAGG CGGCGCCGCA TTTCAAGATC CCCGAATGGG AGCAGCAGAT GTCGGCCGGA
GCCGTTTGCC TCAATCTGCT GATGGCCGCG AATGCCCTTG GCTTTGCTTC GAACTGGCTG
ACGGAATGGT ATGCCTTCGA TGAGCGGGCC TACCCGCTTC TCGGCGTGGC ACCGGGGGAG
AGGATCGCAG GCTTCATTCA CATCGGTACG GCCATGGTAC CGCCGACGGA GCGGCCCCGG
CCCGAACTCG AGGAAATCGT CACCTGGGTC GGAAAGGGGG ATGATTGA
 
Protein sequence
MKTEIKLVDY LACRRSIPAF QMGEPGPGRA EVEEMLKLAS RAPDHGKLAP WRFIVYRGEE 
RARISAELKK MALAAKPDMP DEMIKVEETR LTRAPVVVAV VSKAAPHFKI PEWEQQMSAG
AVCLNLLMAA NALGFASNWL TEWYAFDERA YPLLGVAPGE RIAGFIHIGT AMVPPTERPR
PELEEIVTWV GKGDD