Gene Smed_1049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1049 
SymbolfolE 
ID5321895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1118694 
End bp1119311 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content59% 
IMG OID640789992 
ProductGTP cyclohydrolase I 
Protein accessionYP_001326737 
Protein GI150396270 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0302] GTP cyclohydrolase I 
TIGRFAM ID[TIGR00063] GTP cyclohydrolase I 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.399467 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCCA TAGTAAAGAA TTTTCCTGTG CTCGACGATA CAAGCGGTCG TCCGACGCAA 
AAGGAAGCCG AAGAAGCCGT TCGTGTATTG TTGCGCTGGG CGGGCGAAGA TCCGGCACGA
GAAGGCTTGA AGGACACGCC CGCGCGTGTC GCCAAGGCAT ATCGGGAAAT TTTCGGCGGC
TACGATCTCG CGGCGGAAGA CGTGCTCGGC CGAACCTTCG AGGAAGTCTC CGGCTACGAT
GATATCGTGC TCGAAAAGGA CATCCCGTTC TATTCGCATT GCGAGCACCA TATGGTGCCG
ATTATCGGCA AGGCCCATAT CGCCTACCTG CCGAACGGTC GCGTGCTCGG CCTTTCCAAA
ATCGCCCGTG TCGTCGATAT TTACGCCCGC CGCCTGCAGA CGCAGGAGGC AATGACGGCG
CAGATCGCCA GGGCCATCGA TGAGACCCTC GTGCCCCGGG GCGTGGCGGT GATGATCGAA
GCCGAGCATT TGTGCATGGC CATGCGCGGC ATCAAGAAGC AGGGCGCCAC GACGATGACG
ACGACCTTCA CTGGTGAGTT CAAGAGCGAA CCGGCTGAAC AGGTCCGTTT CATGACGATG
CTTCGGGGTT TCAAATAA
 
Protein sequence
MDAIVKNFPV LDDTSGRPTQ KEAEEAVRVL LRWAGEDPAR EGLKDTPARV AKAYREIFGG 
YDLAAEDVLG RTFEEVSGYD DIVLEKDIPF YSHCEHHMVP IIGKAHIAYL PNGRVLGLSK
IARVVDIYAR RLQTQEAMTA QIARAIDETL VPRGVAVMIE AEHLCMAMRG IKKQGATTMT
TTFTGEFKSE PAEQVRFMTM LRGFK