| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1047 |
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| Symbol | |
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| ID | 5321893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1116820 |
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| End bp | 1117785 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640789990 |
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| Product | patatin |
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| Protein accession | YP_001326735 |
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| Protein GI | 150396268 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAACT GGACATTTAC GCGTAACAGT CAGATTGCCG ATCTTTCCGG CGCAAACGGC
TCGTCGGTCA CGACCACTCC TCCAGCACCA CCGATTTCCC AGTCCGTAAA GCCTAAAATT
GCTCTGGCAC TCGGTGGCGG CGCTGCGCGG GGGTGGGCCC ATATCGGCGT ACTGAAGGCC
CTCGACGAAG AGGGCATCGA AGTCGGAATG ATTGCCGGCA CCTCAATCGG TGCGCTCGTC
GGCGGCTGCT ATCTGGCGGG CAAGCTCGAT GAATTGGAAA TGTTCGCCCG CTCCCTTACC
GTGCGCCGCA TTGCCGGCTT GCTCGATTTC GCCATCGGCG GCGGTGGCCT GTTCGGTGGC
CTGCGGCTTA CCAAGCGCAT GCAGGAGCAT CTGCAGAACC TCAACATCGA GGATCTCGAT
CGGCCCTTCG TCGCCGTCGC CACTGAAGTT TACAGCGGCC ATGAGGTGTG GATCGAGAAA
GGCTCCCTCA TCACGGCCAT CAGGGCATCC TACGCATTGC CCGGGATTTT CGAACCCGTC
AAAGCCAACG GCCGAACCCT AATCGACGGC GCTCTCGTCA ATCCCGTTCC CGTTTCAGTC
TGCCGCGCGC ATGAGCAATT GCACGTCGTT GCCGTCAATC TGAACTATGA CGTTTACGGG
CGCTCCGCCG TGGTCAAGCA CAACGCCGGT GTCGAATCGC CGGACGTGCC CGCGACGGAG
GTTAACCGCT TTTCAGCACG GCTCGGCATG ACCAGCGTCA TGGTCCAAGC CTTCAACATC
ATTCAGGATC GTATTTCGCG CGCCCGGCTG GCAGGTGATC CGCCGGATCT GTCTCTCCAC
CCGAAGCTCA ACGATATCGG ACTTTCCGAA TTCCATCGCG CAGGCGAAGC GATCGATCGA
GGTTATCAGG AAGCCAAGGT CAAACTCTCC GAGATCAGGC GCATGCAGGA AACGCTGCTG
CGTTGA
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| Protein sequence | MLNWTFTRNS QIADLSGANG SSVTTTPPAP PISQSVKPKI ALALGGGAAR GWAHIGVLKA
LDEEGIEVGM IAGTSIGALV GGCYLAGKLD ELEMFARSLT VRRIAGLLDF AIGGGGLFGG
LRLTKRMQEH LQNLNIEDLD RPFVAVATEV YSGHEVWIEK GSLITAIRAS YALPGIFEPV
KANGRTLIDG ALVNPVPVSV CRAHEQLHVV AVNLNYDVYG RSAVVKHNAG VESPDVPATE
VNRFSARLGM TSVMVQAFNI IQDRISRARL AGDPPDLSLH PKLNDIGLSE FHRAGEAIDR
GYQEAKVKLS EIRRMQETLL R
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