| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1004 |
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| Symbol | rpmD |
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| ID | 5321849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1076959 |
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| End bp | 1077162 |
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| Gene Length | 204 bp |
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| Protein Length | 67 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640789946 |
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| Product | 50S ribosomal protein L30 |
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| Protein accession | YP_001326692 |
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| Protein GI | 150396225 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1841] Ribosomal protein L30/L7E |
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| TIGRFAM ID | [TIGR01308] ribosomal protein L30, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0620766 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00478074 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGGCTAAGA AGGAAGTTGC CAAGAAGACG GTTACCGTCG AGCAGATCGG TAGCCCCATT
CGCCGTCCGG CCGTGCAGCG TCAGACGCTC GTCGGCCTGG GCCTCAACAA GATGCACCGG
GTACGCACGC TGGAAGACAC TCCAGCCGTT CGCGGCATGA TCCGGGCCGT CCAGCACCTC
GTTCGCGTCG TCGACGAGAA GTGA
|
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| Protein sequence | MAKKEVAKKT VTVEQIGSPI RRPAVQRQTL VGLGLNKMHR VRTLEDTPAV RGMIRAVQHL
VRVVDEK
|
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| |