Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1002 |
Symbol | rplR |
ID | 5321847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 1075881 |
End bp | 1076243 |
Gene Length | 363 bp |
Protein Length | 120 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640789944 |
Product | 50S ribosomal protein L18 |
Protein accession | YP_001326690 |
Protein GI | 150396223 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0256] Ribosomal protein L18 |
TIGRFAM ID | [TIGR00060] ribosomal protein L18, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.168724 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.00975315 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTAGCA GGAAAGATAC TCTTGTGCGT CGCGCCAGCC GCGTGCGCCG TCAAATCAAG GCGGTTGCCA ACGGCCGCCC GCGCCTGTCG GTTCATCGCT CGTCGAAGAA CATCTATGCG CAGATCATCG ATGATGTTGC CGGCAAGACG ATTGCCTCGG CATCGACTCT CGACACGGAT CTGCGTTTTT CGCTGAAGAC CGGCGCTGAT ACCGAAGCCG CTACGGCTGT CGGCAAGCTC CTGGCGGAGC GTGCTTCCAA GGCGGGCGTC AAGGACGTTG TCTTTGACCG TGGCGCCTTC ATCTACCACG GCCGCATCAA GGCGCTGGCC GAGGCAGCTC GCGAAGGCGG CCTGAACTTC TAA
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Protein sequence | MASRKDTLVR RASRVRRQIK AVANGRPRLS VHRSSKNIYA QIIDDVAGKT IASASTLDTD LRFSLKTGAD TEAATAVGKL LAERASKAGV KDVVFDRGAF IYHGRIKALA EAAREGGLNF
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