Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0976 |
Symbol | rplJ |
ID | 5321821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 1052552 |
End bp | 1053139 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640789918 |
Product | 50S ribosomal protein L10 |
Protein accession | YP_001326664 |
Protein GI | 150396197 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0244] Ribosomal protein L10 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0194348 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCCGG GTGACAAAGG CAAACCCGGC AGGGCTGCGA TGAGCAACCC TGCCAACTGG AGACAGACAG TGGAAAGAGC GGAAAAACGC GAATTCGTCA CGGAGCTGAA CGAAGTCTTC AAGGCTTCCG GTTCGGTTGT CGTGGCCCAC TATGCTGGTG TCACAGTTGC GCAGATGAAC GACTTCCGTT CGAAGATGCG CGCTGCTGGC GGCACCGTCA GAGTCGCGAA AAACCGCCTG GCCAAGATCG CTCTTCAGGG CACGGAGTCT GAAGGGATGA CCGATCTCTT CAGGGGACAG ACGCTGATCG CTTTCAGCGA AGACCCCGTA ACGGCTCCGA AGGTCGTCAT GGATTTCGCC AAGACCAACG ACAAGCTCGT TGTACTCGGC GGCGCCATGG GGGCAACCAC GCTCAACGCC GAAGGTGTCA AGTCGCTCGC GACCCTGCCT TCGCTCGATG AGCTGCGCGC GAAGCTGCTG GGCCTCCTCA ATGCCCCGGC AACCCGCGTC GCGACGGTTG TCGCAGCACC GGCAAGCCAG CTTGCCCGCG TGTTCTCGGC CTACGCCAAG AAGGACGAAG CCGCCTGA
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Protein sequence | MIPGDKGKPG RAAMSNPANW RQTVERAEKR EFVTELNEVF KASGSVVVAH YAGVTVAQMN DFRSKMRAAG GTVRVAKNRL AKIALQGTES EGMTDLFRGQ TLIAFSEDPV TAPKVVMDFA KTNDKLVVLG GAMGATTLNA EGVKSLATLP SLDELRAKLL GLLNAPATRV ATVVAAPASQ LARVFSAYAK KDEAA
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