| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0954 |
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| Symbol | |
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| ID | 5321795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1028226 |
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| End bp | 1028672 |
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| Gene Length | 447 bp |
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| Protein Length | 148 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640789893 |
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| Product | 3-dehydroquinate dehydratase |
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| Protein accession | YP_001326643 |
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| Protein GI | 150396176 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0757] 3-dehydroquinate dehydratase II |
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| TIGRFAM ID | [TIGR01088] 3-dehydroquinate dehydratase, type II |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0330586 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTTCGA CTATCTTTGT GCTGAACGGC CCAAACCTGA ACGCGCTCGG CAAACGCGAA
CCGGGTATCT ATGGCGGCAA GACGCTTGCC GACATAGAGG CCATGTGCAA GGCGGAGGCA
AAGCTCCTGG GGTTTGATAT CGACTTCCGC CAGTCGAATC ATGAGGGCAC GCTGGTCGAC
TGGTTACACG AAGCTGGGGA AAAATCCGTC GGCATCGCGA TCAACCCAGC CGCCTACGGA
CACACCTCTA TCGCCATGCA CGATGCCATT CGTGCGATTA CTGTCCCGGT GGTGGAACTG
CATCTTTCGA ATATTCACGC GCGCGAGGAA TTCCGGCATA AGTCGATGAT CGCGCCAGCC
GTCAAAGGCG TTATCTGCGG CTTCGGCGCT CAGAGTTACA TTCTGGCGCT GCATGCGTTA
AAGAACCTGA CGGAAAAATC CAAATAA
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| Protein sequence | MASTIFVLNG PNLNALGKRE PGIYGGKTLA DIEAMCKAEA KLLGFDIDFR QSNHEGTLVD
WLHEAGEKSV GIAINPAAYG HTSIAMHDAI RAITVPVVEL HLSNIHAREE FRHKSMIAPA
VKGVICGFGA QSYILALHAL KNLTEKSK
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