Gene Smed_0934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0934 
Symbol 
ID5321775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1011938 
End bp1012549 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content62% 
IMG OID640789874 
Productputative glycerol-3-phosphate acyltransferase PlsY 
Protein accessionYP_001326624 
Protein GI150396157 
COG category[S] Function unknown 
COG ID[COG0344] Predicted membrane protein 
TIGRFAM ID[TIGR00023] acyl-phosphate glycerol 3-phosphate acyltransferase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.330103 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.582468 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACATAT TTTCCTGGCA GTTGGGGCTG CCTTCTACGC TCGCATGCCT TGTTTTCGGT 
TATCTGCTGG GCTCGATCCC ATTCGGCCTC ATTCTGACGC GAATGGCGGG CCTCGGTGAT
GTGCGCAAGA TCGGCTCCGG CAATATCGGT GCGACCAATG TGCTTAGAAC CGGCAATAAG
AAGCTTGCGG CCACCACGCT GCTGCTGGAT GCGCTGAAGG GGACGGCGGC TGCAGCGATC
GCGTCCCTCT GGGGAGTAGA GGCAGGCATG GCCGCCGGGC TGGCCGCCTT TCTCGGGCAC
CTTTTTCCGG TCTGGCTTTC CTTCAAGGGC GGCAAGGGCG TTGCGACCTA TATCGGAGTT
CTGCTCGGCC TCGTGCCGGT GATGGTGCTT CTTTTCGCCG CCGCCTGGCT GGCCGTCGCG
AAGATCTCCC GCTATTCCTC TCTTTCGGCG CTCGTCGCCA CCGCCATCAT TCCCGTCGCA
CTCTATGCGA CCGGCAACGG CAAGGTGGCC CTGCTCTTTG CAGTCATGAC GCTTATCGCC
TGGGTCAAGC ACCGCGCCAA CATCCAGCGA CTCATGAGCG GGACCGAAAG CCGGATCGGG
GAAAAGGGCT GA
 
Protein sequence
MDIFSWQLGL PSTLACLVFG YLLGSIPFGL ILTRMAGLGD VRKIGSGNIG ATNVLRTGNK 
KLAATTLLLD ALKGTAAAAI ASLWGVEAGM AAGLAAFLGH LFPVWLSFKG GKGVATYIGV
LLGLVPVMVL LFAAAWLAVA KISRYSSLSA LVATAIIPVA LYATGNGKVA LLFAVMTLIA
WVKHRANIQR LMSGTESRIG EKG