Gene Smed_0923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0923 
Symbol 
ID5321764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp998681 
End bp999973 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content63% 
IMG OID640789863 
ProductDNA polymerase IV 
Protein accessionYP_001326613 
Protein GI150396146 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA GCGCCGCCCC AACCTCCGGT TTCTGCCGTG ATTGCCTCAA GGAGCAAACC 
GCCCAGACGC GACGGTGTCT TGGGTGCGGC AGCCCACGGC TCCTCCGGCA CTCCGAACTC
TATCGCCTGA CCCTGGCGCA TATCGACTGC GACGCCTTCT ATGCCTCAGT GGAGAAGCGT
GACAATCCGG AACTTGCCGA CCGGCCGGTG ATCATCGGCG GCGGCAAGCG TGGCGTCGTC
TCCACGGCGT GTTACATCGC CCGCATTCAT GGCGTGCGCT CCGCCATGCC AATGTTCAAA
GCCCTCGAAG CCTGTCCCCA GGCCGTCGTT ATCAGGCCCG ACATGGAGAA ATATGTGCGT
GTCGGGCGCG AGGTCAGAGC GATGATGTCG GAACTGACGC CTCTCGTGCA ACCGCTATCG
ATAGACGAGG CCTTCCTCGA TCTGAGCGGC ACCGAGCGGC TTCACCACGA TCCGCCCGCC
CGGACGCTTG CCCGCTTCGC CAAGCGGGTG GAGCAGGAGA TCGGCATTAC GGTTTCCGTC
GGCCTTTCCT ATTGCAAATT CCTGGCCAAG GTCGCCTCGG ATCTTCAGAA GCCGCGCGGT
TTCTCTGTCA TCGGCCAGGC AGAAGCGGTG ACCTTCCTGA AAGACAAGTC CGTTACCCTC
ATCTGGGGCG TCGGCAAAGT CTTTGCCACC ACGCTCGAAA GGGACGGCAT CCGCACGATC
GGGCAGCTCC AGACGATGGA AGAGGCGGAC CTCATGCGCC GCTACGGTAC GATGGGCCAG
CGGCTCTACA GGCTTTCGCG CGGCCTTGAC GAAAGGACTG TCGAAATCGA GGGCGAAGCG
AAAAGCGTCT CCTCCGAGAC CACCTTCAAC GACGACCTTG CGCGCCGCGA TGAACTCGTA
TCGCATCTAA GGCGCCTCAG CGAACAGGTG GCTTCGCGCT TGCGAAACTC CGCCCTGGCC
GGCCAGACGG TGGTGCTGAA GCTCAAGACC TCGGACTTCA AGATCCGCAC TCGCAACCGC
CGGCTCGAAA GCCCCACCCG CCTTGCCGAT CGCATTTTCC GCACGGGCCT GCAACTGCTG
GAGAAGGAGG TCGACGGGAC GAAATATCGG CTGATCGGGA TCGGCGTCAG CGATCTCGTG
GATCCCGACC TCGCCGATCC GCCCGATCTC GTCGATCCGC TGGCTGCCCG GCGGGCTGCC
GCCGAAGATG CGATCAACAG ATTGCGGGAC AAGTTCGGCA AGGCGACCGT CGAGACCGGA
TACACGTTCG GCAAGGGACC GCGCGATCGA TAG
 
Protein sequence
MTDSAAPTSG FCRDCLKEQT AQTRRCLGCG SPRLLRHSEL YRLTLAHIDC DAFYASVEKR 
DNPELADRPV IIGGGKRGVV STACYIARIH GVRSAMPMFK ALEACPQAVV IRPDMEKYVR
VGREVRAMMS ELTPLVQPLS IDEAFLDLSG TERLHHDPPA RTLARFAKRV EQEIGITVSV
GLSYCKFLAK VASDLQKPRG FSVIGQAEAV TFLKDKSVTL IWGVGKVFAT TLERDGIRTI
GQLQTMEEAD LMRRYGTMGQ RLYRLSRGLD ERTVEIEGEA KSVSSETTFN DDLARRDELV
SHLRRLSEQV ASRLRNSALA GQTVVLKLKT SDFKIRTRNR RLESPTRLAD RIFRTGLQLL
EKEVDGTKYR LIGIGVSDLV DPDLADPPDL VDPLAARRAA AEDAINRLRD KFGKATVETG
YTFGKGPRDR