| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0922 |
|---|
| Symbol | |
|---|
| ID | 5321763 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | - |
|---|
| Start bp | 997329 |
|---|
| End bp | 998555 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640789862 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001326612 |
|---|
| Protein GI | 150396145 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1376] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCGTTCCG CTCTCCGGAT GGGATTTGCA GTCTTCATCA TGGCGTCGCC ATCCGCGTTT
GCGGCCGGCG CCAAAGCGCC TTTGCAGGTC GTCGTATCGC GGGAGCAGCA GTCTCTCGTC
GTCTATGATG GCGACACCGT TGTCGCCACG TCGAGAGTGT CCACCGGCAA GGCGGGACAC
GCTACCCCGA CGGGCATCTT CTCGATTTTG GAGAAGCGCC GGCGTCACGA GTCGAACATC
TATTCCAATG CACCGATGCC GTTCATGCAG CGACTGACCT GGTCGGGCAT CGCACTGCAT
GGCTCGAACC ATGTGCCGGA CTATCCCGCT TCGCATGGTT GCGTGAGGCT GCCGAGCAAA
TTCGCAGCCC GTCTGTTCAA GATGACGAGC CACGGCATGC ATGTGATCGT ATCGGATCGA
CAGGTCGCGC CGGTCGAGGT TGCGGACGAA ATGCTCTTTC AGCCGAGCAG GCCGCCGCCG
CAAGGGCCAG CCCTGTCGGA CATCCCCCTG CGGCCGGCAA TCGGGGGTCT CAACCGGAGC
GCAGTCGAAG TCGCGATGAC CGACAAGCGC CCCGCGCCCA TTGCATCCGC CGAAGAGAAG
GCCCCGATCC GCATATTGAT CACACGCCGC GGCACCCAAG AAAACGTGCG CGATCTCCAG
ACACTCCTCA ACACGCTCGG CTACGATGCC GGCGTGCCGG ACGGCGTCAA CGGCCCGACG
ACCGCCGCTG CGATCGAAAC ATTTCAAGGG GAAGAGGGCC GACCCGTCGA CGGCAAGATA
ACACCGGAGT TGATCGACGC CGTCTTTCGC AAGGCGGGCC GCAGTGCACC GCTGAACGGC
GTGCTGCGGG TGCGCAGACA ATTCCAGCCG GTTTTCGAGG CCGAGATCGC CATTGCAGAA
CCGGAAAGCC CGCTCGGAAC GCATCTGCTG CAGTTTCAGA ATCTCGACGC GCGAACCGGA
GAGGGCAAAT GGTTCGGCAT TTCACTCGAG AACAGGCTGT CAAAGGCGAC GAAGAAGCGG
CTCGGTATCA CAGCCGAAGG CGGCCCTGAC CTGACCTCTA CACTGGAATG GACGCTCGAT
CGCATCACTG TGCCCGAGGA CGTTCGCGAA CGCATCTCCG GCCTCCTGTC CAACGGTTCG
TCACTCTCCA TCACCGATAT CGAATTTGGG CTGGAGACCG GCAAGGGTAC GGATTTCATC
ACGATCACCA GAGAGACACG CGAATGA
|
|---|
| Protein sequence | MRSALRMGFA VFIMASPSAF AAGAKAPLQV VVSREQQSLV VYDGDTVVAT SRVSTGKAGH
ATPTGIFSIL EKRRRHESNI YSNAPMPFMQ RLTWSGIALH GSNHVPDYPA SHGCVRLPSK
FAARLFKMTS HGMHVIVSDR QVAPVEVADE MLFQPSRPPP QGPALSDIPL RPAIGGLNRS
AVEVAMTDKR PAPIASAEEK APIRILITRR GTQENVRDLQ TLLNTLGYDA GVPDGVNGPT
TAAAIETFQG EEGRPVDGKI TPELIDAVFR KAGRSAPLNG VLRVRRQFQP VFEAEIAIAE
PESPLGTHLL QFQNLDARTG EGKWFGISLE NRLSKATKKR LGITAEGGPD LTSTLEWTLD
RITVPEDVRE RISGLLSNGS SLSITDIEFG LETGKGTDFI TITRETRE
|
|---|
| |