Gene Smed_0897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0897 
Symbol 
ID5321738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp968501 
End bp969544 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content60% 
IMG OID640789837 
ProductNADH dehydrogenase subunit H 
Protein accessionYP_001326587 
Protein GI150396120 
COG category[C] Energy production and conversion 
COG ID[COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.135331 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCTT TCTTTTCGAC CTATGTCTGG CCAACGGCCA TCATGATCGG CCAGTCGCTC 
CTGCTTCTGG TCGCGCTGCT GCTTTTCATC GCCTATATCC TGCTCGCCGA CCGCAAGATC
TGGGCGGCCG TTCAGCTTCG CCGCGGTCCT AACGTCGTCG GCCCCTGGGG GCTGTTCCAG
TCCTTTGCCG ACCTTCTGAA ATTCGTCTTC AAGGAGCCGG TCATTCCGGC CGGCGCCAAC
AAGACGATCT TTCTGCTCGC GCCGCTCGTC TCCGTGACGC TTGCACTCGC CGCCTGGGCG
GTGATCCCGC TCAATGCGAA TTGGGTGATC GCGAACGTCA ATGTCGGCAT CCTTTTCGTC
TTCGCCATAT CCTCACTCGA GGTTTATGGC ATCATCATGG GCGGCTGGGC ATCCAATTCG
AAATATCCGT TCCTCGGCGC ATTGCGCTCC GCGGCGCAGA TGGTGTCCTA TGAGGTCTCG
ATCGGCTTCG TCATTGTCAC CGTGCTGCTC TGCGTCGGAT CGCTCAATCT GACCGACATC
GTGATCGCGC AGAACGACGG CCTCGGTACC ATGCTGGGCC TGCCGGCGTC CTTCCTCGAC
TGGCACTGGC TGTCGCTCTT CCCGATGTTC ATCATCTTCT TCATCTCGGC CCTGGCCGAG
ACGAACCGTC CGCCCTTCGA CCTCCCGGAA GCCGAGTCGG AACTGGTCGC CGGCTTCATG
GTCGAATACG GCTCCACCCC GTACATGATG TTCATGCTCG GCGAATACGC GGCGATCTGC
CTGATGTGTG CCCTGACCAC GATCCTGTTC CTCGGCGGCT GGCTGCCACC GGTCGACATC
TGGATCCTGA ACTGGGTCCC GGGGATCATC TGGTTCGTGC TGAAGGCCTC GCTGGTGTTC
TTCATGTTCG CGATGGTGAA GGCCTTCGTA CCGCGCTACC GCTACGACCA GCTGATGCGT
CTCGGCTGGA AGGTCTTCCT GCCGCTCTCG CTGGCGATGG TCGTCATCGT CGCATTCGTT
CTGAAGCTGA TGGGTTGGGC ATGA
 
Protein sequence
MDAFFSTYVW PTAIMIGQSL LLLVALLLFI AYILLADRKI WAAVQLRRGP NVVGPWGLFQ 
SFADLLKFVF KEPVIPAGAN KTIFLLAPLV SVTLALAAWA VIPLNANWVI ANVNVGILFV
FAISSLEVYG IIMGGWASNS KYPFLGALRS AAQMVSYEVS IGFVIVTVLL CVGSLNLTDI
VIAQNDGLGT MLGLPASFLD WHWLSLFPMF IIFFISALAE TNRPPFDLPE AESELVAGFM
VEYGSTPYMM FMLGEYAAIC LMCALTTILF LGGWLPPVDI WILNWVPGII WFVLKASLVF
FMFAMVKAFV PRYRYDQLMR LGWKVFLPLS LAMVVIVAFV LKLMGWA