Gene Smed_0888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0888 
Symbol 
ID5321729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp960392 
End bp960757 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content55% 
IMG OID640789828 
ProductNADH dehydrogenase subunit A 
Protein accessionYP_001326578 
Protein GI150396111 
COG category[C] Energy production and conversion 
COG ID[COG0838] NADH:ubiquinone oxidoreductase subunit 3 (chain A) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.681236 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAAC TTCTCGGTTC CTACGTACCG ATCGCGATTT TCATTGGGAT CGCGCTGGTG 
ATCGGCCTCG CACTCCTGGT CGCTCCTTTC GCCGTCGCCT TCAAGGCGCC TGATTCGGAA
AAACTGTCGG CTTACGAGTG CGGCTTCAAT GCGTTCGACG ACGCCCGCAT GAAGTTCGAC
GTCCGCTTCT ATCTCGTGTC GATCCTGTTC ATCATCTTCG ATCTCGAAGT CGCCTTCCTT
TTTCCCTGGG CGGTTTCGTT CAAGGCGATC GGCTGGTTCG GCTTCTGGTC GATGATGGTC
TTCCTTCTGG TCCTGACGGT CGGCTTTATC TATGAATGGA AGAAGGGAGC GCTGGAATGG
AATTAG
 
Protein sequence
MTELLGSYVP IAIFIGIALV IGLALLVAPF AVAFKAPDSE KLSAYECGFN AFDDARMKFD 
VRFYLVSILF IIFDLEVAFL FPWAVSFKAI GWFGFWSMMV FLLVLTVGFI YEWKKGALEW
N