| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0885 |
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| Symbol | |
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| ID | 5321723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 949610 |
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| End bp | 951976 |
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| Gene Length | 2367 bp |
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| Protein Length | 788 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640789822 |
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| Product | hypothetical protein |
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| Protein accession | YP_001326575 |
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| Protein GI | 150396108 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.854858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGGAGG CGACGCAGAC CTTCGACGCT GCGGGAGAAC TCATCAAGCA GGTTCAGTCG
AATGACGACG GGTCCAGGCA GACCGATACG TTCGATGTCG CCAAAAAGCA GAGCTGGGCG
CAGCAGACGG ATGTCAACGA CAAAGCGGGC GCCCTCACCC AGCGTTCCTA CCTGAACGAC
GACAAGACGC GCGTCACCAC ATTCTACGAT GTCGCGAAAG CGAAACCCTG GTCGAGCGCC
GTGCAATATT TCGACGCTGC GGGCAAGATG ACGAAGCAGG TTCAGACGAA TGACGACGGG
TCCAAACAGA CCGATACGTT CGATGTCGCC AAAAAGCAAA GCTGGGCGCA GCAGACGGAC
CTCAACGACA AAGCCGGGGC GTTGACGCAA CGCTCCTATC TCAACGACGA CAAAACGCGG
ACGACCACGC TTTACGACCC TGCCAAGGCC AAATCCTGGT CCACCGTCAC CCAATATTTC
GACGCTGCCG GCAAACTGAG CAAGCAGGAG CAGGTCAACG ACAACGGCAC GAAAGTGACG
GACTGGTTCG ATCTGACCGA CGCGCAGACC TGGGACCGGC AGACCTATTT CTATGACAAG
GCCGGTGTGC GGACCCAGCG CTCGTGGGTC TATGACGACA AGACGAAAAC CAACATCTAC
TACGATACGA CCAAGACCAA GGGATATTCC AGCCTCACTC AATATCTCGA CGTTGCGGGC
AAGCTGACCC GGCAAGATGA AGTGAAGGAC GACGGCACCA GGCGAATCGA CTGGTATGAC
GTTCCGAAAG CGCAAACCTG GACGCAGCAG ACGGACCTGT TCGACAAGGC CGGGGCCCGC
ACCCAGCGCT CCTTCCTGTA CGACGACGGT TCGAAGTCCA ACACCTTCTA CGACGTTGCC
AAGAGGCAGG CATATTCGAG CCTTACGGAC TATCTCGACA AAGCAGGCAA GCTGACGAAA
CGGCACCAGA CGCTGGACAA CGGCACGAAA CAGACGGACT GGTTCGACAT CGCCAAGACG
CAGGCGTGGA CGCAGCAGAC CTATTCCTAT GATGCCGCCG GAGCGACTAC GAAAAAGACG
TGGCTGAACG ATAACGGCAC CAAAAACATC ATCTTCTACG ATGTCGCCAA GGCAAAAACC
TATTCCAGCC TCACCCAATA CCTCGACGCA GCGGGCAAGC TGACGAAGCA GGTGCAGATC
AATGACAACG GCACCAAGCA GACGGACTGG TACGATCTCG CCGACACGAA GGCTTGGTGG
CAGCAGACAG ATTGGAACGA TGCCTCCGGC GCGCTGACGC AGCGTTCGTA TCTGGACGAT
AGCAAGACGC GGGTGACGAC GAAATACGAT CCGGGAAAGA CGCAGAAATG GACGACTATC
GTTCAGAATT TCGATGCCGC CGGCAAGATG ACGACGCAGG TCCAATCGAA CGACGATGGG
TCGAAGGAAA CGACGACATA CGACGTGGCG AATGCTGAGA AGTGGTCGCA GTTGAGCGAT
GTTACTGACA CAGCAGGAAA ACTCGTGGAG CGCTCACAGC TGAACGATGA CAAGTCCCGC
ACTATCATCA CAGACGATCC ATCCGGCGCA CACCGAACCA CAAAGCATTT CAATGCGGCT
GGGCAACTCG TAGAGTCAAG CGATCTAAGT GGAGGTGTTT TAAAGACGAC CTACTATGAC
TTTGATAACT CGAAATCGTG GGCACATTGG ACTCACGGGT TGATGATCCC CCGACCGCTC
GCCCCATTGA CATTTCAATC CACGACTTGG GACAACGGAA AGGTCACCAG CGGCAAACCA
CCCGTCCTCC TCGACCTCAA CGGCGACGAT CACATCGACC TCCGCCCCTT CAATCCATTG
GCCACGAACG GCCCTGCCTT CGACTGGGAT GGCGACGGCA CACGCGACGC GACCGCCTGG
TTCGGACCGG AAGACGGCAT TCTCGCGATC GACCTTGCAG CCAACGGCGC GTCTGGTTCG
GACGGCCTGA TCGACCAAGA ACGGGAACTC GCCTTCGCCT CCTGGGCCGA AGGCGGCGGA
GTGGCTTCCG ACATGGAGGG CTTGAGGCTG GTCTTCGATA CCAACCGCGA CAATGCCCTC
GACGCGCAGG ATGCGCGCTG GAACGAATTC CGGGTCTGGC AGGATCACAA TCAGAACGGC
GTCACCGATA CCGGCGAGCT CATGACCATG TCGGAAGCGG GCATCCGGCT CGTCAACCTG
CTGCCATCCA CCGACGGAGC AAAGGCCTTC GACGACGGCT CTGTCATCAC CGGCACGAGC
TCGATGACGA TGACGGATGG CACGACGAGG CTCGTCGCCG ACACCACTCT GGCATTCCGC
CCGTCCAGCC TCAACCAGGT CGCCTGA
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| Protein sequence | MEEATQTFDA AGELIKQVQS NDDGSRQTDT FDVAKKQSWA QQTDVNDKAG ALTQRSYLND
DKTRVTTFYD VAKAKPWSSA VQYFDAAGKM TKQVQTNDDG SKQTDTFDVA KKQSWAQQTD
LNDKAGALTQ RSYLNDDKTR TTTLYDPAKA KSWSTVTQYF DAAGKLSKQE QVNDNGTKVT
DWFDLTDAQT WDRQTYFYDK AGVRTQRSWV YDDKTKTNIY YDTTKTKGYS SLTQYLDVAG
KLTRQDEVKD DGTRRIDWYD VPKAQTWTQQ TDLFDKAGAR TQRSFLYDDG SKSNTFYDVA
KRQAYSSLTD YLDKAGKLTK RHQTLDNGTK QTDWFDIAKT QAWTQQTYSY DAAGATTKKT
WLNDNGTKNI IFYDVAKAKT YSSLTQYLDA AGKLTKQVQI NDNGTKQTDW YDLADTKAWW
QQTDWNDASG ALTQRSYLDD SKTRVTTKYD PGKTQKWTTI VQNFDAAGKM TTQVQSNDDG
SKETTTYDVA NAEKWSQLSD VTDTAGKLVE RSQLNDDKSR TIITDDPSGA HRTTKHFNAA
GQLVESSDLS GGVLKTTYYD FDNSKSWAHW THGLMIPRPL APLTFQSTTW DNGKVTSGKP
PVLLDLNGDD HIDLRPFNPL ATNGPAFDWD GDGTRDATAW FGPEDGILAI DLAANGASGS
DGLIDQEREL AFASWAEGGG VASDMEGLRL VFDTNRDNAL DAQDARWNEF RVWQDHNQNG
VTDTGELMTM SEAGIRLVNL LPSTDGAKAF DDGSVITGTS SMTMTDGTTR LVADTTLAFR
PSSLNQVA
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