Gene Smed_0861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0861 
SymbolrpsI 
ID5321699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp920755 
End bp921222 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content65% 
IMG OID640789798 
Product30S ribosomal protein S9 
Protein accessionYP_001326551 
Protein GI150396084 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0103] Ribosomal protein S9 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0415089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.103809 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACC TTTCCGCACT CAAGGATATC GCCACGACCG CGGAACCGGC TGCTCCGGTT 
CACGTCAAGA AGGTCGACGC GCAGGGCCGC TCCTACGCGA CCGGCAAGCG CAAGGACGCC
GTCGCCCGCG TTTGGATCAA GCCCGGCTCC GGCAAGATCA CCGTCAACGG CAAGCCTTTC
TCGGACTATT TCGCACGTCC GGTTCTGCAG ATGATCCTGC AGCAGCCGGT CGTCGCAGCT
GCCCGTGACG GCCAGTTCGA TATCGACGCG ACCGTTGCCG GCGGCGGCCT TTCCGGTCAG
GCCGGTGCCG TTCGTCACGG CATTTCCAAG GCCCTCACCT ACTTTGAGCC GGGCCTGCGC
GCCGTTCTGA AGCGTGGCGG CTTCCTCACC CGCGACAGCC GCGTGGTCGA GCGCAAGAAG
TACGGCCGTG CGAAGGCACG TCGTTCGTTC CAGTTCTCCA AGCGCTAA
 
Protein sequence
MADLSALKDI ATTAEPAAPV HVKKVDAQGR SYATGKRKDA VARVWIKPGS GKITVNGKPF 
SDYFARPVLQ MILQQPVVAA ARDGQFDIDA TVAGGGLSGQ AGAVRHGISK ALTYFEPGLR
AVLKRGGFLT RDSRVVERKK YGRAKARRSF QFSKR