| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0804 |
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| Symbol | groEL |
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| ID | 5321641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 866544 |
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| End bp | 868172 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640789741 |
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| Product | chaperonin GroEL |
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| Protein accession | YP_001326495 |
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| Protein GI | 150396028 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.451933 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.636529 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGTCA AGGAAGTCAG ATTCACCAGC GATGCCCGCG ATCGCATGCT GCGCGGCGTG
GATATCATGG CCAACGCCGT GCGCGTGACT TTGGGACCGA AGGGGCGGAA CGTCGTCATC
GACAAGTCCT TTGGAGCGCC GCGGATAACC AAGGACGGCG TTTCCGTCGC CAAGGAAATC
GAGCTCGAGG ACAAGTTCGA GAACATGGGG GCGCAGATGC TGCGCGAGGT GGCGTCGCGC
ACCAGCGACA TCGCCGGCGA TGGCACCACC ACGGCCACCG TACTCGCGCA AGCAATCGTC
AGGGAAGGCG CGAAGGCCGT GGCGGCAGGC ATGAACCCGA TGGACCTGAA GCGTGGCATC
GATCTGGCCG TCGAGGCGAT CGTACGGGAA CTCAGGACCA ACGCCCGCAA GGTCTCCAAG
AACGCCGAGA TCGCTCAGGT AGCCACGATT TCGGCCAATG GCGACGCAGA AATCGGTCGC
TACCTTGCCG AAGCCATGGA AAAGGTCGGC AACGAGGGCG TAATCACCGT CGAAGAGGCC
AAGACCGCCG AGATCGAGCT TGAAGTCGTG GAGGGAATGC AGTTCGACCG CGGCTATCTC
TCACCCTATT TCATCACCAA CCAGGAGAAG ATGAGGGTGG AACTGGAAGA CGCCTACATA
CTGCTGCACG AGAAGAAGCT CTCCAACCTG CAGGCGATGA TCCCAATTCT CGAATCGGTC
ATCCAGTCCG GAAAGCCCCT GCTGATCATT GCCGAGGACG TCGAGGGCGA GGCACTCGCG
ACGCTGGTGG TCAACAAGCT GCGCGGCGGC CTGAAGATCG CCGCGGTCAA GGCGCCCGGC
TTCGGCGACC GCCGCAAGTC CATGCTCGAG GACATCGCGA TCCTGACCGG CGGAACCGTC
ATCTCCGAGG AACTCGGGAC TAAGCTCGAG AGCGCGACGA TCGACATCCT CGGCCGCGCG
AAACGCGTGA TGGTCGAAAA GGAGACGACG ACGATCGTCG ACGGCGCCGG GTCGAAGGCG
GACATCGGTG GCCGCGTCGC CCAGATCAAG GCGCAGATCG AGGACACCAC TTCCGACTAC
GATCGGGAGA AGCTGCAGGA GCGGCTCGCC AAGCTCGCGG GCGGTGTCGC CGTGATCCGC
GTCGGCGGCT CGACAGAGAT CGAAGTCAAG GAGAAGAAGG ATCGCGTCGA CGATGCCCTT
CATGCGACGC GGGCGGCGGT CGAAGAAGGC ATCCTGCCGG GCGGCGGCGT GGCGCTGCTA
CGGGTCGTCA GCGTGCTCAA CGGTCTTGCG ACGGCCAACG ACGATCAGCG CGTGGGTATC
GAGATCGTCC GCCGCGCTAT CGAGGCACCC GTCCGCCAGA TCGCCGAGAA CGCCGGCGCC
GAGGGATCCA TTATCGTCGG GAAGTTGCGG GAGAAAGAGG ATTTTGCCTT TGGCTGGAAT
GCCCAGACTG GTGAATTCGG CGATCTCTTT CAAATGGGCG TCATCGACCC AGCAAAGGTC
GTGCGCGCCG CCTTGCAGGA CGCCGCCTCC GTCGCCGGTC TTCTTGTGAC GACGGAAGCG
ATGATCGCCG AGAAACCGAA GAAGGACGGG CAGCCGCAGA TGCCGCCCGC GCCGGGCATG
GATTTCTGA
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| Protein sequence | MAVKEVRFTS DARDRMLRGV DIMANAVRVT LGPKGRNVVI DKSFGAPRIT KDGVSVAKEI
ELEDKFENMG AQMLREVASR TSDIAGDGTT TATVLAQAIV REGAKAVAAG MNPMDLKRGI
DLAVEAIVRE LRTNARKVSK NAEIAQVATI SANGDAEIGR YLAEAMEKVG NEGVITVEEA
KTAEIELEVV EGMQFDRGYL SPYFITNQEK MRVELEDAYI LLHEKKLSNL QAMIPILESV
IQSGKPLLII AEDVEGEALA TLVVNKLRGG LKIAAVKAPG FGDRRKSMLE DIAILTGGTV
ISEELGTKLE SATIDILGRA KRVMVEKETT TIVDGAGSKA DIGGRVAQIK AQIEDTTSDY
DREKLQERLA KLAGGVAVIR VGGSTEIEVK EKKDRVDDAL HATRAAVEEG ILPGGGVALL
RVVSVLNGLA TANDDQRVGI EIVRRAIEAP VRQIAENAGA EGSIIVGKLR EKEDFAFGWN
AQTGEFGDLF QMGVIDPAKV VRAALQDAAS VAGLLVTTEA MIAEKPKKDG QPQMPPAPGM
DF
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