Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0801 |
Symbol | |
ID | 5321638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 861962 |
End bp | 863197 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640789738 |
Product | major facilitator transporter |
Protein accession | YP_001326492 |
Protein GI | 150396025 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.419426 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCAGA TCCGCCCGCT CATCCCGCTG CTCGTCACCG CAGGCATACT GATCGGCGGC AACGGGCTGC AGGGCACCTT CATTTCATTG AGAGCGCTGG ACGAGGGGTT CTCGACCTCG CTCATCGGCG TGGTCGGCGC CGGCTACAAT ATCGGGTTCG CGATCGGCTG CATCTACGTC ACCCGCATCC TCCGCGCGAT CGGTCACATC CGCACCTTTT CGGCAATGGC GGCCATAGCC TCGGCTGCCG CGATCTCCAT GGTTCTCATT ATCGATCCCT GGTTCTGGTT CCTGATGCGA CTCGTCGCCG GGATCTGCTT CGCAAGCCTC TTCGCCACGG TGGAGAGCTG GTTGAATGCC AGCGTCACCA ACGCCAACAG GGGACGCACA TTGTCGGTCT ACCGTCTGGT CGATCTCGGT TCGGTCACAG CGGCGCAATA CGCCATACCC GGCATCGGCA TCGGCGGGTT TGAGCTCTTT GCGATCATTT CCATGGCGCT GACGCTCTCG CTCGTGCCGA TTTCCTTCGC CGACAGATCG AGCCCGGTCA CTCCGGAAGC GATCCGATTC GACGTCAAGA CGCTCTGGAA CATCTCGCCG CTGGCCACCA TTGGCTGCAT CGTCGTGGGC CTGACCAATG CCGCATTCCG CTCGCTCGGC CCGATCTATG CGCAGGAGAT CGGGCTTTCG GTAACGGCAA TCGCGACCTT CATGAGCGCG GGCATCATCG GCGGCGTCGT GTTGCAATAT CCCCTAGGCT ACTACTCCGA CCGGATCGAC CGCAGGCTGA TCATCCTGCT CGCAACCTTC GGCTCCCTGC TTGCGGGCCT CTTCCTCGCC TTCGGCGCCG GCAGCGACGA GTGGCTGAAC TTCGCCGGTA TCTTTGCCTT CGGCGCCTTC GCTATGCCGC TATTTTCGCT ATGCTCGGCA CAAGCCAACG ACCATGCGGC TGAAGGCCAG CATGCGCTGG TTTCGGCAGG CATGCTCTTC TTCTGGTCGC TCGGAGCTAT TATCGGGCCG CTCTTCGCAT CCTTCCTGCT CGAGATATTC GCCCCGCAGG TGCTTTTCAT CTACACGGCC GCGATCCTGG GGGCTTTCAT GCTCTACACA CTCTTGCGCA TGACTGCGCG TAAGCCGGTT CCAACCGAGG AACGGTCGAT GCGCTTTCGC AATCTCCTTC GCACATCGTC CTTCTTCAAC AAGCTTGCCG GCGGCCACGC GCGAAAAGAG CCGTGA
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Protein sequence | MSQIRPLIPL LVTAGILIGG NGLQGTFISL RALDEGFSTS LIGVVGAGYN IGFAIGCIYV TRILRAIGHI RTFSAMAAIA SAAAISMVLI IDPWFWFLMR LVAGICFASL FATVESWLNA SVTNANRGRT LSVYRLVDLG SVTAAQYAIP GIGIGGFELF AIISMALTLS LVPISFADRS SPVTPEAIRF DVKTLWNISP LATIGCIVVG LTNAAFRSLG PIYAQEIGLS VTAIATFMSA GIIGGVVLQY PLGYYSDRID RRLIILLATF GSLLAGLFLA FGAGSDEWLN FAGIFAFGAF AMPLFSLCSA QANDHAAEGQ HALVSAGMLF FWSLGAIIGP LFASFLLEIF APQVLFIYTA AILGAFMLYT LLRMTARKPV PTEERSMRFR NLLRTSSFFN KLAGGHARKE P
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