Gene Smed_0798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0798 
Symbol 
ID5321635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp858040 
End bp859122 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content63% 
IMG OID640789735 
Productputative adenylate/guanylate cyclase 
Protein accessionYP_001326489 
Protein GI150396022 
COG category[T] Signal transduction mechanisms 
COG ID[COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.65462 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.907597 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTGGA GATTTTCCAC GCTCGAGATC ATTCTTTTGC TGCTCGTCGT TGCCGGCAGT 
GGCATGGCCT ATGCGTGGGT GGTCTACGGC GGCGGCGGAT TGATTGGCGC CACCTATGCG
CTCTTCATGT GTATGCCTAT CGTCGCCTTC GAAAGGCACA TCATCTTCCG GCGCCTTTAC
CGGCGGATTC ACGGCTCGCC GACACCGGCG TTTCTCCTCT CGTCGCTGGC CGTTTACTTC
GTATTCTGCA ACGTCGGATA CGCAGCGGCC GGTTTGCTTC TGCATGTCGC CGGCGCCATG
CGCGAAAGCG CGAGCGACGC GATGCTGCCA TCACTGAACG TGCTGGTGTA CGCGCTGGCG
ACATCCGGTC CGATCATTTT CGTGCTCCGG GTGCGCGAAT TGCTCGGCCG CGACGTTTTC
ATGAGCCTGC TGACCGGCCG ATACCGCAAG CCGGTGCAGG AGGAGCGCGT ATTTCTTTTC
ATCGACCTCG CCGGATCGAC ATCGCTCGCC GAGCGCTTCG GCGACCTGCG CATGCAGGAA
TATCTGGGCA AGCTGTTCGC TGCCATGGCT GATCCCGTCC TTCGCCATGG CGGGTCGATC
GACGACTATG TCGGCGACGC TGCCGTGATC ACCTGGCCTT ACGATCGCGC CATTGCCCAC
GCGGCCTGCA TCCGCTGCGT GTTCGACATC CTGGAACAGA TCGAAGCCGA CGCACACCGC
TGGCAAAAAA CCTATGGCGA GGTGCCGCGC CTGCGTGCCG CCCTGCATGG CGGCACGATC
GTTGCCGCGG AGATCGGCGT CGACCGGCAC AAGATCACCT ATTTCGGCGA TACGGTGAAT
ACGACGGCGC GCCTCGAGGG CCTGTGCCGA ACCCTCGACC GCCAGGTTCT GATCTCGGCC
GATCTGCTTC GCCGCTTGCG CACGCCCGTT TTCGTGCGCT GCGAGGATCT CGGCGAACAC
GAGGTCAAGG GCCGCGGCCA GAGGCTCGCG GTCCTCTCGC TTGCGACCGA TAGGCCGGCC
AGCAACGGAC GCGAAGACCA GCCCGTTGTC AGTGCAGGCA CCGAGGCTTT CACCTCGCTG
TAA
 
Protein sequence
MRWRFSTLEI ILLLLVVAGS GMAYAWVVYG GGGLIGATYA LFMCMPIVAF ERHIIFRRLY 
RRIHGSPTPA FLLSSLAVYF VFCNVGYAAA GLLLHVAGAM RESASDAMLP SLNVLVYALA
TSGPIIFVLR VRELLGRDVF MSLLTGRYRK PVQEERVFLF IDLAGSTSLA ERFGDLRMQE
YLGKLFAAMA DPVLRHGGSI DDYVGDAAVI TWPYDRAIAH AACIRCVFDI LEQIEADAHR
WQKTYGEVPR LRAALHGGTI VAAEIGVDRH KITYFGDTVN TTARLEGLCR TLDRQVLISA
DLLRRLRTPV FVRCEDLGEH EVKGRGQRLA VLSLATDRPA SNGREDQPVV SAGTEAFTSL