| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0784 |
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| Symbol | |
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| ID | 5321621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 842231 |
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| End bp | 842869 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640789721 |
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| Product | porin |
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| Protein accession | YP_001326475 |
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| Protein GI | 150396008 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3637] Opacity protein and related surface antigens |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.275504 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0786165 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTATGC TCACCACCAC TCTCATGGCC TCGGCCATGG CCCTCGTTGC CTTCCAGGCC
GCCCACGCCG CTGACGTGGT CGACGAAATT CCGGCTGCTC CGGCTGCCGA ATATACCGAA
CCGGCAGTTC GGAACTGGTC GGGCGCCTAT GTCGGGGGCA CCATCGACTG GCACCATGGC
GAGGCCGATG CGACCGGCAA CAACAAATCG GTCGGAACTG GCGGCGGCCT CTATGGCGGC
TACAACGTTC AGGATGGCCA AATGGTTTAT GGCGGTGAGG CCGACATCAA CTACACCGGC
AACGACTCGC ATTCGAGCGG CCGTCGAGTC CAGCAGGGGC TCAACGGCTC GGTTCGCGCC
CGCGTCGGTG TCGATGTGAA TCCGGTCCTC GTCTACGGCA CGGCCGGCGT CGCCCTCGGC
AACGCCGAGC TCAAGACGCC TGCGGGCTCC GACGACAAGA CGCTGGTCGG CTGGACGGCC
GGCGTCGGCG CCGAGACCTT CGTCACCGAC AACATCACGG CGCGCGCCGA ATACCGTTAC
ACGGATTACG GTTCGAAGGA CTTCCGCACC GGCGGCACGA CGATCTCGTC CGGCTATGAC
GAGCACGCCG TCAAGCTCGG TATGGGCGTC AAGTTCTGA
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| Protein sequence | MRMLTTTLMA SAMALVAFQA AHAADVVDEI PAAPAAEYTE PAVRNWSGAY VGGTIDWHHG
EADATGNNKS VGTGGGLYGG YNVQDGQMVY GGEADINYTG NDSHSSGRRV QQGLNGSVRA
RVGVDVNPVL VYGTAGVALG NAELKTPAGS DDKTLVGWTA GVGAETFVTD NITARAEYRY
TDYGSKDFRT GGTTISSGYD EHAVKLGMGV KF
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