| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0761 |
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| Symbol | pdxA |
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| ID | 5321598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 816721 |
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| End bp | 817749 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640789698 |
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| Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
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| Protein accession | YP_001326452 |
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| Protein GI | 150395985 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.1195 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACGAGA CGAGCATCGG GCCGGTCGCC CTGACCATGG GCGACCCGGC CGGGATCGGT
CCGGATATCA GCCTTTCCGT CTGGTTGAAG CGGGCCGATC GGCTGACGCC GCCGTTTCTT
TATGTGGGTG ATCCTGCAGT GCTTGCCGCC CGCGCCAAGC TCCTGGGCGA GACGGTGCCG
ATATGCGAGA CCGATTGTTT CGGGGCCGTT GCCGCTTTCC AGCAGACCTT TCCCGTTTTG
CCCGTCCGCT CCCCTGCCCC CGTTGTTCCC GGTCGACCTG ATCCGGCGAA CGCCTCGGCC
GTGACGGGTG CGATCGACAC GGCCGTTCGG CTCGCGATGG CCGGCGAAGC CTCGGCCGTC
GCCACCAACC CGATTGCCAA GGCAGTGCTC TACGAAGCGG GTTTCCTCTT TCCGGGCCAT
ACCGAGTATC TGGCGGACCT CGCCCAGCGA GCAACCGGCC TCGCCGCCCT GCCGGTGATG
ATGCTGGCGG GCCCGAAACT GCGTGCCGTT CCGGTGACGA TCCATATCCC GCTCAAGGAC
GTGCCCGCCG CGCTGACGCC GGAACTGATC TATCGAACCT GCACGATCGC CGCAGCCGAT
CTGAGAAGCC GCTTCGGTCT GCCGGCGCCA CGCCTCGCAG TTGCCGGCCT CAACCCGCAT
GCCGGCGAAG GCGGCGCGCT CGGCCGCGAG GATGACGCCC TCATTCGGCC CGTGATCGAC
CGCATGCGCG CCGAGGGGCT CGACGTCGTC GGGCCTTTGC CGGCGGACAC CATGTTCCAC
GACCGCGCGA GAGAGACTTA CGACGTCGCC ATCTGCATGT ATCACGATCA GGCGTTGATA
CCGGCCAAGG CGCTCGGCTT CGACGACAGC GTCAACGTCA CCCTCGGCCT GCCCTTCATC
AGAACCTCGC CGGATCACGG GACGGCTTTC AGCCTTGCCG GAAAGGGGAT CGCGCGCGAG
GACAGCCTTC TGGCGTCTCT GCGGCTCGCT GCGGAACTTG CCCGCAACGC CAAAGGGATG
AAGCACTGA
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| Protein sequence | MNETSIGPVA LTMGDPAGIG PDISLSVWLK RADRLTPPFL YVGDPAVLAA RAKLLGETVP
ICETDCFGAV AAFQQTFPVL PVRSPAPVVP GRPDPANASA VTGAIDTAVR LAMAGEASAV
ATNPIAKAVL YEAGFLFPGH TEYLADLAQR ATGLAALPVM MLAGPKLRAV PVTIHIPLKD
VPAALTPELI YRTCTIAAAD LRSRFGLPAP RLAVAGLNPH AGEGGALGRE DDALIRPVID
RMRAEGLDVV GPLPADTMFH DRARETYDVA ICMYHDQALI PAKALGFDDS VNVTLGLPFI
RTSPDHGTAF SLAGKGIARE DSLLASLRLA AELARNAKGM KH
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