Gene Smed_0732 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0732 
Symbol 
ID5321569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp787191 
End bp787844 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content67% 
IMG OID640789669 
ProductAzlC family protein 
Protein accessionYP_001326423 
Protein GI150395956 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) 
TIGRFAM ID[TIGR00346] 4-azaleucine resistance probable transporter AzlC 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.100734 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.28736 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCCGC TTATCGTGGC GGTGATGCCG ATCGGGCTCG TCTTCGGAGC GATCGCCGCA 
ACCAAGGGCC TGTCGAGCCT CGAAACCTTT TTGATGAGCG CGCTCGTCTT CGCCGGCGGC
TCGCAATTCG TCGCGCTCGA CATCTGGGCT CACCCCGCCT CATGGGCGGC TCTCGGATTT
TCGGCGCTGC TCGTCAACAT CCGCCATCTT CTGATGAGCG CGTCCATCGG CACGAAGATG
CCGGCCTTTT CCGGCCCGGC GAAATATGCC GCAATGCTTC TGCTTGCAGA CGAGATCTGG
GCCATGGCCG AAGTCCGGGC GGGCGAGACG CGGCTCACGC CGGCCTGGTA TGCAGGTCTT
GCGCTACCCT TCTATCTGGT CTGGGTCATG GCCGGACTTG CCGGCTCGCT TGCCGGTGCG
TTCCTCGGGG GCCCGAAGGC GCTCGGCCTC GATTTCGCCT TTCCGGCGGT CTTCATCGTC
CTGCTCATTG GCTTCTGGAA GGGACGCGGA ACGGGTGCGG TTCTCGCCGC GAGCGCAGCG
GCGGCGGTGC TCGCGCACCA GTTCCTCCCC GGAGTCTGGT ACATCGCCGC CGGCGCGGCC
GCGGGCGTCA TTGCGGCGCT TTTCACCGGG GAACGCCAGG AGGCCTGCGC GTGA
 
Protein sequence
MAPLIVAVMP IGLVFGAIAA TKGLSSLETF LMSALVFAGG SQFVALDIWA HPASWAALGF 
SALLVNIRHL LMSASIGTKM PAFSGPAKYA AMLLLADEIW AMAEVRAGET RLTPAWYAGL
ALPFYLVWVM AGLAGSLAGA FLGGPKALGL DFAFPAVFIV LLIGFWKGRG TGAVLAASAA
AAVLAHQFLP GVWYIAAGAA AGVIAALFTG ERQEACA