Gene Smed_0680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0680 
SymbolacpS 
ID5321517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp732250 
End bp732669 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content62% 
IMG OID640789617 
Product4'-phosphopantetheinyl transferase 
Protein accessionYP_001326371 
Protein GI150395904 
COG category[I] Lipid transport and metabolism 
COG ID[COG0736] Phosphopantetheinyl transferase (holo-ACP synthase) 
TIGRFAM ID[TIGR00516] holo-[acyl-carrier-protein] synthase
[TIGR00556] phosphopantethiene--protein transferase domain 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATCG GCATAGGCAG CGATCTCATC GATATCAGAC GCATCGAAAA TTCGCTCCAG 
CGCTTCGGCG AGCGTTTCGT AAACCGGTGT TTCACCGACA TCGAGATCGC CAAATCCGAC
GGCCGCAAGA ACCGCGCGGC GTCCTATGCC AAGCGCTTCG CCGCCAAGGA GGCCTGCTCC
AAGGCACTCG GCACCGGCTT AGCGCAGGGC GTATTCTGGA AAGAAATGGG GGTCGTCAAC
CTGCCCGGCG GGAAGCCGAC GATGCAACTG ACCGGCGGCG CGGCAGCGCG CCTTCGGGAA
ATGTTGCCGG TCGGACACCG CGCCGCGATC CATCTGACGA TCACCGACGA CTTCCCGCTT
GCGCAAGCTT TCGTGATTAT CGAGGCGCTG CCGGTTGCCC CCGCCGAGGG AACGGTTTAG
 
Protein sequence
MIIGIGSDLI DIRRIENSLQ RFGERFVNRC FTDIEIAKSD GRKNRAASYA KRFAAKEACS 
KALGTGLAQG VFWKEMGVVN LPGGKPTMQL TGGAAARLRE MLPVGHRAAI HLTITDDFPL
AQAFVIIEAL PVAPAEGTV