Gene Smed_0676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0676 
Symbol 
ID5321513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp728394 
End bp728801 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content62% 
IMG OID640789613 
ProductDNA-directed RNA polymerase subunit omega 
Protein accessionYP_001326367 
Protein GI150395900 
COG category[K] Transcription 
COG ID[COG1758] DNA-directed RNA polymerase, subunit K/omega 
TIGRFAM ID[TIGR00690] DNA-directed RNA polymerase, omega subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGCG TCACCGTCGA AGACTGCATC GACAAGGTCG AAAACCGTTT TGAACTCGTC 
CTTCTTGCCA GCCACCGCGC GCGCCTGGTG TCCCAGGGCG CACCGATCAC GGTTGACCGC
GACAACGACA AGAACCCGGT CGTTGCGCTG CGCGAGATCG CCGACGAGAC CCTGTCGCCC
GGCGATCTGA AGGAAGACCT TATCCATTCG TTGCAGAAGC ACGTCGAGGT GGACGAGCCG
GAACCCGATC CGGCGTCGCT GGTTCAGACG GAAGCGACAC CTGCCTTCGC CGAAGCCGCC
GAAGAGGAGG ACCAGCCGGA AGCGCTGACC TTCGACCGCA TGTCCGAAGA AGAACTGTTG
GCCGGTATCG AAGGCCTCGT TCCTCCGGAA AAGAGCGACG ACTACTGA
 
Protein sequence
MARVTVEDCI DKVENRFELV LLASHRARLV SQGAPITVDR DNDKNPVVAL REIADETLSP 
GDLKEDLIHS LQKHVEVDEP EPDPASLVQT EATPAFAEAA EEEDQPEALT FDRMSEEELL
AGIEGLVPPE KSDDY