Gene Smed_0656 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0656 
Symbol 
ID5321492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp708995 
End bp709984 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content61% 
IMG OID640789592 
Productglycosyl transferase family protein 
Protein accessionYP_001326347 
Protein GI150395880 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGG TCCTGGAGGG CGTCGAGCTA TCCATAGTGG TACCGGTGTT CAACGAGGAA 
GAGAGCGTCG GGCCGCTGGT CACGCGTATC AGGACCGCGA TGGCCGGATT TCTCGAGCCG
TGGGAGCTCA TCCTCGTTGA TGACGGCAGC ACGGACCGAA CCCTCCCGAA TGCGCGCAAG
GAGCTCTCGC ACCAGGAGCT GCGGCTCAAG ATCATCGAAC TCCAGAAGAA TTTCGGCCAG
ACCGCCGCTA TGCAGGCGGG CATCGACGCT GCCGCCGGCC GCCTGATCGT TACGCTTGAC
GGCGATCTTC AGAACGATCC GGCGGACATT CCCCATATGG TCGCCGCGAT CGAGGAGCGT
GGGCTCGACC TCCTTGTCGG CTGGCGGCAA AACCGGCGCG ACGCTCTGAT CCTGCGCAAG
ATTCCCTCCT GGTGCGCCAA TCTCCTGATC GGCAAGATCA CCGGCGTGAA GTTGCACGAT
TACGGCTGCA GCCTCAAGAT CTACCGGGGT TCCGTCATCA AGCAGGTGAA GCTGATGGGG
GAAATGCACC GATTCATTCC GGCCTGGGTG GCGGGCGTCG TGCCGAGCAG CCGGATCGGC
GAGATGCCGG TGACCCATCA TGCGCGCCAT TACGGCACCT CCAAATACGG GATCTCGCGC
ACATTCCGGG TCGTCCTCGA TCTCCTCGCT GTCTTGTTCT TCATGCGCTA CAAGGCGCGG
CCCGGGCACT TTTTCGGCTC CATCGGGCTC GCCGCCGGCG GCCTAAGTGC GCTGATCCTG
TTCTATCTTG CAATAGACAA GTTCATCCTC GGCAACGACA TCGGAACCCG GCCGATGCTG
ATCGTCGGAG TGATGCTGTT TCTCTCCTCG ATCCAGCTCA TTACCACCGG CATTCTCTCG
GAAATGATGG CGCGCGCCTA TTTCCGTGAC AATGAACCGA CGAGCTACAT CGTGCGCCAG
ACTTTCGTGC GGGAGCCCCC GCATGCTTGA
 
Protein sequence
MTEVLEGVEL SIVVPVFNEE ESVGPLVTRI RTAMAGFLEP WELILVDDGS TDRTLPNARK 
ELSHQELRLK IIELQKNFGQ TAAMQAGIDA AAGRLIVTLD GDLQNDPADI PHMVAAIEER
GLDLLVGWRQ NRRDALILRK IPSWCANLLI GKITGVKLHD YGCSLKIYRG SVIKQVKLMG
EMHRFIPAWV AGVVPSSRIG EMPVTHHARH YGTSKYGISR TFRVVLDLLA VLFFMRYKAR
PGHFFGSIGL AAGGLSALIL FYLAIDKFIL GNDIGTRPML IVGVMLFLSS IQLITTGILS
EMMARAYFRD NEPTSYIVRQ TFVREPPHA