Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0649 |
Symbol | |
ID | 5321485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 700717 |
End bp | 702381 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640789585 |
Product | electron-transferring-flavoprotein dehydrogenase |
Protein accession | YP_001326340 |
Protein GI | 150395873 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.480515 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAGC AACAAGAACT CCCCGAACGC GAGAGCATGG AATTCGACGT GGTGATCGTC GGGGCGGGGC CGGCGGGGCT TGCCGCGGCG ATTCGCCTGA AGCAGGTCAA TCCGGAGCTT TCGGTCGTGG TGCTGGAAAA GGGCGCCGAA GTCGGCGCGC ATATCCTCTC GGGCGCCGTC GTCGACCCTA TCGGTATCGA CCGGCTGCTG CCCGGTTGGC GCGACGAACC GGATCATCCG TTCAAAACCG AAGTGACCGA TGACCATTTC CTCTTTCTGG GGCCTGCCGG CTCGGTGCGC CTGCCGAACA TGCTGATGCC GCCGCTGATG AACAATCACG GCAACTACAT CGTCTCGCTC GGCAATGTCT GTCGCTGGCT CGCCGCCCAG GCGGAAGGCC TCGGCGTCGA AATCTATCCG GGCTTTGCCG CGACCGAAGT GCTCTACAAT GACGAGGGCG CGGTCATCGG CGTCGCCACC GGCGACATGG GGATCGAGCA AAACGGCGAG CCGGGGCCGA ATTTCGCCCG CGGCATGGAA CTGCTCGGCA AGTACACCCT CATCGGCGAG GGCGTGCGCG GCTCGCTCGC TAAGCAGCTG ATCGCCAGAT ACAAGCTCGA CGAGGGCCGT GACGTGCCGA AGTTCGGCAT CGGGCTGAAG GAGCTCTGGG AGGTCAAGCC AGAAAACCAC AAGCCCGGCC TCGTGCAGCA TTCCTTCGGC TGGCCGCTCG GAATGAAGAC CGGTGGCGGT TCCTTCCTCT ATCACCTGGA GGACAACCTC GTCGCTGTCG GCTTCGTGGT GCATCTGAAC TACAAGAATC CCTATCTTTT TCCATTCGAG GAGTTTCAGC GCTTCAAGAC CCATCCGGCG ATCCGCGGCA CTTTCGAGGG TGGAAAAAGG CTCTCCTATG GCGCCCGCGC CATCACCGAG GGCGGCTACC AGGCGGTGCC CAAACTCTCC TTCCCCGGTG GGGCGCTGAT CGGCTGCTCG GCGGGTTTCG TCAACGTGCC GCGCATCAAG GGCAGCCACA ATGCCGTGTT GTCGGGGATT CTCGCGGCGG AAAAGCTGGC TGCGGCGATC GCCGAAGGCC GCGCAAATGA TGAGCCGATC GAGATCGAGC GCGGCTGGCG CGAGAGTGCA ATCGGCCAGG ACCTGAAAAG GGTGAGGAAC GTCAAGCCGC TGTGGTCGCG CTTCGGCACC GCCGTCGGCG TGGCCCTGGG CGGTCTCGAC ATGTGGACGA ACCAGCTCTT CGGCTTTTCC TTTTTCGGGA CGCTGAAGCA CGGCAAGACC GACGCCCAAT CGCTGGAGCC GGCCTCGAAG CACCAGAAGA TCGATTACCC GAAGCCGGAC GGGGTGCTGA CCTTCGACCG GCTCTCCTCG GTGTTCCTGT CGAACACCAA TCACGAGGAG GACCAGCCGG TGCATCTTCA GGTGAAGGAC TGGGACCTGC AGAAGCGCTC GGAATACGAG GTCTATGCCG GCCCATCGTC GCGTTACTGT CCGGCCGGCG TTTACGAATG GGTGGAAAAG GACGGCCAGC CGACCTTCGT CATCAACGCC CAGAACTGCG TCCACTGCAA GACCTGCGAC ATCAAGGACC CGAACCAGAA CATCAACTGG GTGCCGCCAC AAGGGGGCGA AGGCCCGGTC TATCCGAACA TGTAA
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Protein sequence | MTEQQELPER ESMEFDVVIV GAGPAGLAAA IRLKQVNPEL SVVVLEKGAE VGAHILSGAV VDPIGIDRLL PGWRDEPDHP FKTEVTDDHF LFLGPAGSVR LPNMLMPPLM NNHGNYIVSL GNVCRWLAAQ AEGLGVEIYP GFAATEVLYN DEGAVIGVAT GDMGIEQNGE PGPNFARGME LLGKYTLIGE GVRGSLAKQL IARYKLDEGR DVPKFGIGLK ELWEVKPENH KPGLVQHSFG WPLGMKTGGG SFLYHLEDNL VAVGFVVHLN YKNPYLFPFE EFQRFKTHPA IRGTFEGGKR LSYGARAITE GGYQAVPKLS FPGGALIGCS AGFVNVPRIK GSHNAVLSGI LAAEKLAAAI AEGRANDEPI EIERGWRESA IGQDLKRVRN VKPLWSRFGT AVGVALGGLD MWTNQLFGFS FFGTLKHGKT DAQSLEPASK HQKIDYPKPD GVLTFDRLSS VFLSNTNHEE DQPVHLQVKD WDLQKRSEYE VYAGPSSRYC PAGVYEWVEK DGQPTFVINA QNCVHCKTCD IKDPNQNINW VPPQGGEGPV YPNM
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