Gene Smed_0649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0649 
Symbol 
ID5321485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp700717 
End bp702381 
Gene Length1665 bp 
Protein Length554 aa 
Translation table11 
GC content63% 
IMG OID640789585 
Productelectron-transferring-flavoprotein dehydrogenase 
Protein accessionYP_001326340 
Protein GI150395873 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.480515 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGC AACAAGAACT CCCCGAACGC GAGAGCATGG AATTCGACGT GGTGATCGTC 
GGGGCGGGGC CGGCGGGGCT TGCCGCGGCG ATTCGCCTGA AGCAGGTCAA TCCGGAGCTT
TCGGTCGTGG TGCTGGAAAA GGGCGCCGAA GTCGGCGCGC ATATCCTCTC GGGCGCCGTC
GTCGACCCTA TCGGTATCGA CCGGCTGCTG CCCGGTTGGC GCGACGAACC GGATCATCCG
TTCAAAACCG AAGTGACCGA TGACCATTTC CTCTTTCTGG GGCCTGCCGG CTCGGTGCGC
CTGCCGAACA TGCTGATGCC GCCGCTGATG AACAATCACG GCAACTACAT CGTCTCGCTC
GGCAATGTCT GTCGCTGGCT CGCCGCCCAG GCGGAAGGCC TCGGCGTCGA AATCTATCCG
GGCTTTGCCG CGACCGAAGT GCTCTACAAT GACGAGGGCG CGGTCATCGG CGTCGCCACC
GGCGACATGG GGATCGAGCA AAACGGCGAG CCGGGGCCGA ATTTCGCCCG CGGCATGGAA
CTGCTCGGCA AGTACACCCT CATCGGCGAG GGCGTGCGCG GCTCGCTCGC TAAGCAGCTG
ATCGCCAGAT ACAAGCTCGA CGAGGGCCGT GACGTGCCGA AGTTCGGCAT CGGGCTGAAG
GAGCTCTGGG AGGTCAAGCC AGAAAACCAC AAGCCCGGCC TCGTGCAGCA TTCCTTCGGC
TGGCCGCTCG GAATGAAGAC CGGTGGCGGT TCCTTCCTCT ATCACCTGGA GGACAACCTC
GTCGCTGTCG GCTTCGTGGT GCATCTGAAC TACAAGAATC CCTATCTTTT TCCATTCGAG
GAGTTTCAGC GCTTCAAGAC CCATCCGGCG ATCCGCGGCA CTTTCGAGGG TGGAAAAAGG
CTCTCCTATG GCGCCCGCGC CATCACCGAG GGCGGCTACC AGGCGGTGCC CAAACTCTCC
TTCCCCGGTG GGGCGCTGAT CGGCTGCTCG GCGGGTTTCG TCAACGTGCC GCGCATCAAG
GGCAGCCACA ATGCCGTGTT GTCGGGGATT CTCGCGGCGG AAAAGCTGGC TGCGGCGATC
GCCGAAGGCC GCGCAAATGA TGAGCCGATC GAGATCGAGC GCGGCTGGCG CGAGAGTGCA
ATCGGCCAGG ACCTGAAAAG GGTGAGGAAC GTCAAGCCGC TGTGGTCGCG CTTCGGCACC
GCCGTCGGCG TGGCCCTGGG CGGTCTCGAC ATGTGGACGA ACCAGCTCTT CGGCTTTTCC
TTTTTCGGGA CGCTGAAGCA CGGCAAGACC GACGCCCAAT CGCTGGAGCC GGCCTCGAAG
CACCAGAAGA TCGATTACCC GAAGCCGGAC GGGGTGCTGA CCTTCGACCG GCTCTCCTCG
GTGTTCCTGT CGAACACCAA TCACGAGGAG GACCAGCCGG TGCATCTTCA GGTGAAGGAC
TGGGACCTGC AGAAGCGCTC GGAATACGAG GTCTATGCCG GCCCATCGTC GCGTTACTGT
CCGGCCGGCG TTTACGAATG GGTGGAAAAG GACGGCCAGC CGACCTTCGT CATCAACGCC
CAGAACTGCG TCCACTGCAA GACCTGCGAC ATCAAGGACC CGAACCAGAA CATCAACTGG
GTGCCGCCAC AAGGGGGCGA AGGCCCGGTC TATCCGAACA TGTAA
 
Protein sequence
MTEQQELPER ESMEFDVVIV GAGPAGLAAA IRLKQVNPEL SVVVLEKGAE VGAHILSGAV 
VDPIGIDRLL PGWRDEPDHP FKTEVTDDHF LFLGPAGSVR LPNMLMPPLM NNHGNYIVSL
GNVCRWLAAQ AEGLGVEIYP GFAATEVLYN DEGAVIGVAT GDMGIEQNGE PGPNFARGME
LLGKYTLIGE GVRGSLAKQL IARYKLDEGR DVPKFGIGLK ELWEVKPENH KPGLVQHSFG
WPLGMKTGGG SFLYHLEDNL VAVGFVVHLN YKNPYLFPFE EFQRFKTHPA IRGTFEGGKR
LSYGARAITE GGYQAVPKLS FPGGALIGCS AGFVNVPRIK GSHNAVLSGI LAAEKLAAAI
AEGRANDEPI EIERGWRESA IGQDLKRVRN VKPLWSRFGT AVGVALGGLD MWTNQLFGFS
FFGTLKHGKT DAQSLEPASK HQKIDYPKPD GVLTFDRLSS VFLSNTNHEE DQPVHLQVKD
WDLQKRSEYE VYAGPSSRYC PAGVYEWVEK DGQPTFVINA QNCVHCKTCD IKDPNQNINW
VPPQGGEGPV YPNM