| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0644 |
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| Symbol | |
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| ID | 5321480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 696167 |
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| End bp | 697456 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640789580 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001326335 |
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| Protein GI | 150395868 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.414584 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGCGA ACTTCGCTTC CGTTTTCAGC CTGATGCTGT CCACCTTTCT GATGATGGTG
GCCTTCGGGC TGCAGAGCTA CGTCATCCCG GTACGCTCCG TGGCGGAAAG CTGGTCGACC
CTCACGATCT CGATTTTCGC GACGGGTTAT ACGCTGGGTT TCACCCTTTC CTGCATTGTG
ACACCTAAGT TCGTCCTGCG TGTCGGCCAC GTTCGCGTCT TCACCGCTCT GATAACGCTG
CTTTCGATCG CGATCCTGAT GTGCGGGCTC GTCGTCGATT GGCGTGCGTG GATCGGGTTT
CGCGCCATAT CCGGGTTCGC GATCGCAGGA AGTTACCTCG TCATCGAAAG TTGGCTGAAC
GAACGGGTGA CGAACGAGAA TCGCGGCCTG CTCTTCTCGC TCTACCTCAT TACCACCATG
GTCGGCACCA TCGGCGGTCA ATACCTGGTA CCGCTCGGCG ATCCCAGCAA CACCTCGCTG
TTCATCCTCT GCGGCGTCCT GTTCTCGCTC GCCTTGCTGC CGACGGCCCT CTCGTCCTCA
CCAATGCCGG CACCGCCGGC ACGGGCGGAC TTCGACATCC CCGCGCTCTA TCGACGCTCG
CCGGTGGCCG TCGTCGGCGG TTTTCTCGCC GGCGCGCTCT CCGGTGCCTG GCTCAACCTC
GGCGGCGTCT TCACCCAGAA GATCGGTCTT TCCACCGGCG AAGGAGCGAC GCTGCTGGCG
TCGCTCCTCG CCGGCAGCGC GATCTCCCAG GTACCGATCG GCCGCGCCTC CGACCGGATG
GACCGGCGCA TCGTCATGGT CGCCTGCGGC ATCGCCGGCG TCGTGTCCTG CCTTGCCATG
TCCGTCATGA TCGACAGCAG TCCGCCCGTC CTGTATGCGC TCGCGGCCTG CATCGGCACG
GTCCTCTTTC CGATCTACGC GTTGAACGTC GCCCACGCCA ACGACCTCGC ACGCCCCGAC
GAGTATGTGG AAATTTCATC CGGCCTGATG ATTACCTACG GCCTGGGCAC GATTTCAGGA
CCGCTGATGG TCGGCCCGGT GATGGATCGT TTCGGCCCCG TCGCACTGTT CGTCGCGCTC
GCCGTGTATT TTGCTCTCTA CAGCGGCTAT GCCGCCTGGC GCATTCTCCG GCGAGAGCAG
CATGACGGCC TCGTATCGAA GACCGATTTT CAGGCGACCA CTGTCATGCC TACACCCGGT
CCGGACGTCA CCGGTCCGGT CTCACAGCAG GACGCGGGCG ATCTCATCGA GGACGATACC
GTTCCTGCCT GGGAGGAAGG TGCCCGGTAG
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| Protein sequence | MLANFASVFS LMLSTFLMMV AFGLQSYVIP VRSVAESWST LTISIFATGY TLGFTLSCIV
TPKFVLRVGH VRVFTALITL LSIAILMCGL VVDWRAWIGF RAISGFAIAG SYLVIESWLN
ERVTNENRGL LFSLYLITTM VGTIGGQYLV PLGDPSNTSL FILCGVLFSL ALLPTALSSS
PMPAPPARAD FDIPALYRRS PVAVVGGFLA GALSGAWLNL GGVFTQKIGL STGEGATLLA
SLLAGSAISQ VPIGRASDRM DRRIVMVACG IAGVVSCLAM SVMIDSSPPV LYALAACIGT
VLFPIYALNV AHANDLARPD EYVEISSGLM ITYGLGTISG PLMVGPVMDR FGPVALFVAL
AVYFALYSGY AAWRILRREQ HDGLVSKTDF QATTVMPTPG PDVTGPVSQQ DAGDLIEDDT
VPAWEEGAR
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