Gene Smed_0614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0614 
Symbol 
ID5321450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp662165 
End bp662596 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content59% 
IMG OID640789550 
ProductMucR family transcriptional regulator 
Protein accessionYP_001326305 
Protein GI150395838 
COG category[K] Transcription 
COG ID[COG4957] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.405846 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAGA CTTCGCTCGG TACGAGCAAT GAACTCCTGG TTGAGCTTAC GGCGGAGATC 
GTTGCCGCCT ATGTAAGCAA CCATGTGGTT CCGGTTGCCG AGCTGCCGAC GCTCATAGCC
GACGTGCATT CGGCACTCAA CAACACGACC GCTCCAGCGC CGGTGGTCGT TCCGGTGGAG
AAGCCGAAGC CCGCGGTTTC GGTGCGAAAG TCGGTGCAGG ACGACCAGAT CACTTGTCTC
GAATGTGGCG GGACCTTCAA GTCGTTGAAG CGGCATCTGA TGACCCACCA TAATCTTTCG
CCGGAAGACT ACCGCGACAA GTGGGATTTG CCTGCCGACT ATCCGATGGT CGCGCCGGCC
TATGCGGAAG CCCGCTCGCG GCTCGCCAAG GAAATGGGTC TCGGACAGCG TCGTAAGCGC
CGCGGTAAAT AA
 
Protein sequence
MTETSLGTSN ELLVELTAEI VAAYVSNHVV PVAELPTLIA DVHSALNNTT APAPVVVPVE 
KPKPAVSVRK SVQDDQITCL ECGGTFKSLK RHLMTHHNLS PEDYRDKWDL PADYPMVAPA
YAEARSRLAK EMGLGQRRKR RGK