Gene Smed_0590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0590 
Symbol 
ID5321426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp638442 
End bp638888 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content60% 
IMG OID640789526 
Productcytochrome c class II 
Protein accessionYP_001326281 
Protein GI150395814 
COG category[C] Energy production and conversion 
COG ID[COG3909] Cytochrome c556 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATAC GAGCTCTTAT GCTTGCCGCG GCCCTGGCGG GCCTGGGCGT GACCGCCGTC 
ACGGCGGCCG ACGAGCCGCA GGCGGTGCGC CAGCAATTGA TGAAAAAAGT CGGGCAGGCC
ACAGGTGCGC TCAGCGGCAT CGCCAAGGGT GAAAAGCCCT ATGACGCCGA GATCGTAAAA
GCTTCGCTGG CGACGATCAG CGAAACGGTG AAAGTCTTCC CGGATCACTT CCCGGCTGGT
TCCGAGACAG GGATGGAAAC CGAAGCGAGC CCGAAGATCT GGGAGAATAT GGCGGACTTC
AAGGCGAAGG CCGCCAAGCT CGGGGGGGAC GCAGAAAAAA TCCTTGCTGA ATTGCCCGCG
GATCAGGCCG GCGTCGGTGC TGCACTCGGC ATCATCGGAA AAGACTGCAG CAGCTGTCAC
GAGAGCTATC GGATCAAGAA GGATTGA
 
Protein sequence
MKIRALMLAA ALAGLGVTAV TAADEPQAVR QQLMKKVGQA TGALSGIAKG EKPYDAEIVK 
ASLATISETV KVFPDHFPAG SETGMETEAS PKIWENMADF KAKAAKLGGD AEKILAELPA
DQAGVGAALG IIGKDCSSCH ESYRIKKD