Gene Smed_0565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0565 
Symbol 
ID5321401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp613739 
End bp614347 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content63% 
IMG OID640789501 
Producttranscriptional regulator BetI 
Protein accessionYP_001326256 
Protein GI150395789 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID[TIGR03384] transcriptional repressor BetI 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.359685 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAAGA TCGGAATGGA GCCGGTACGC CGAAAGGCGC TTGTGGACGC GGCGCTGCGC 
GTGATTGGCG ATCAGGGTAC GCTTGCCGTC ACCATGTCCG AGATCGCGCG GACCGCCGGG
GTCTCGCCCG CCCTTGCGCA TCATTATTTC GGCAGCAAGG ACCAGTTGCT GATCGCCACC
ATCCGCAGCC TTCTCGGCAA ATTGCGCGAC GATGCGATAA GCGCGATGAA GGCTGCGACG
ACGCCGCGCG AGCAGGTGAG TGCACTGATC CGGGTGAGCT TCCGCGCCGA TCAATTCGCG
CCGGAGACGG TCGCAGCCTG GCTCGCCTTC TATTCGGAAG CGCAACGTTC GGAGGAAGTG
CGGCGCCTGC TCGTCATCTA TGCACGCCGG CTGCGCTCCA ACCTGCTAGC AGGCCTGAGA
ACGCTCTGCG CCGCAGATGA CGCAGAGCGC ATTGCCGAGG GCACCGCTGC GATGATCGAC
GGGCTCTACA TCCGGCAAAG TTTGAAATCG GCGCCGATCA GCATCGAAGC CTCGATCGCG
CTCACGGAAG ACTATGTGAA TGCGCATTTG AAGGCGGGTG GTGGGGACTA CCCCTCTCCT
CGGGTTTAA
 
Protein sequence
MPKIGMEPVR RKALVDAALR VIGDQGTLAV TMSEIARTAG VSPALAHHYF GSKDQLLIAT 
IRSLLGKLRD DAISAMKAAT TPREQVSALI RVSFRADQFA PETVAAWLAF YSEAQRSEEV
RRLLVIYARR LRSNLLAGLR TLCAADDAER IAEGTAAMID GLYIRQSLKS APISIEASIA
LTEDYVNAHL KAGGGDYPSP RV