Gene Smed_0546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0546 
Symbol 
ID5321380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp589212 
End bp589583 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content61% 
IMG OID640789480 
Producthypothetical protein 
Protein accessionYP_001326237 
Protein GI150395770 
COG category[S] Function unknown 
COG ID[COG2852] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0884882 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.680217 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCATG CTGACGTATC GCCGGAAGCT CGCGACAATG CGCGCCGCAT GCGCAGTGCG 
ATGACGGAGG CGGAGGTAAA GCTCTGGAAC GAACTGCGCG CGCATCGGCT GATGGGGCTT
GATTTTCGCC GGCAAGTTCC GATCGCTGGT TACATAGTGG ATTTCGCCTG CGCCGAGCAT
CGATTGATCG TCGGGATCGA TGGGTCGCAG CATGCCGGAG CGGAGGAAGC CGATTGCGAT
CGGCGGCGTA CGCAGCGTCT CGAAGCGCGG GGCTGGACGG TTCTGCGCTT TTGGAACGAT
GACGTGCTGC GAGATGTGAA CGACGTGTGC GAGCATATTG TCCGTGTGAT CGGGAAGGGG
GCGACTGAGT GA
 
Protein sequence
MPHADVSPEA RDNARRMRSA MTEAEVKLWN ELRAHRLMGL DFRRQVPIAG YIVDFACAEH 
RLIVGIDGSQ HAGAEEADCD RRRTQRLEAR GWTVLRFWND DVLRDVNDVC EHIVRVIGKG
ATE