| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0519 |
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| Symbol | |
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| ID | 5321353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 562711 |
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| End bp | 564399 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640789453 |
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| Product | cytochrome c oxidase subunit I type |
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| Protein accession | YP_001326210 |
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| Protein GI | 150395743 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGGAA CAGCCGTTCA TCACGATCAA CGCCATGATC ATTCCGATCA TGGCCACGCG
GAACACGCGC ACAAGCCGCT GACATTTTTT CAGCGCTGGT TCCTGTCGAC CAACCACAAG
GACATCGGAA CGCTCTACCT GATCTTCGCG ATCATCGCCG GTATCATCGG CGGAACGCTG
TCGGTCTTCA TGCGCGCCGA ACTGCAGGAG CCGGGCATCC AGATCTTCCA CGGTCTGGCG
CAGATGGTCT ATGGTTTCGA GGGTGATGCT GCCATCGACG GCGGCAAGCA CATGTTCAAC
GTCTTCACGA CAGCGCACGC CCTGATCATG ATCTTCTTCA TGGTCATGCC GGCCTTGATC
GGTGGTTTCG CCAACTGGAT GGTGCCGATC ATGATCGGCG CACCGGACAT GGCGTTCCCG
CGCATGAACA ACATTTCCTT CTGGCTCATC GTGCCGGCAT TCCTGCTCGT GCTGCTTTCG
ATGTTCGTCG AAGGTCCTGC AGGCGCCTAT GGTGCGGGCG GCGGCTGGAC GATCTATCCG
CCATTCTCGA CATCCGGCAT GCCCGGGCCG GCAATGGATC TTGCAATTCT CGGCCTGCAT
ATTGCCGGTG CCTCGTCGAT CCTCGGTGCG ATCAACTTCA TCACCACCAT CCTCAACATG
CGCGCTCCGG GCATGACGCT GCACAAGATG CCGCTCTTCG CCTGGTCGGT TCTGATCACC
GCCTTCCTGC TCCTGCTCTC GCTGCCGGTT CTCGCAGGTG CGATCACGAT GCTGCTGACG
GACCGCAACT TCGGCACAAC CTTCTTCTCG CCGGAAGGCG GCGGCGACCC GATCCTGTTC
CAGCACCTGT TCTGGTTCTT CGGTCACCCG GAAGTGTACA TCTTGATCCT GCCGGGCTTC
GGCATCGTCA GCCACATCAT CTCGACCTTC TCGCGCAAGC CGATCTTCGG CTATCTCGGG
ATGGCCTACG CCATGGTCGC TATCGGCGCG GTCGGCTTCA TCGTGTGGGC GCACCACATG
TACACGGTCG GCATGTCGCT CCAGACGCAG CGCTACTTCG TCTTCGCGAC GATGGTCATC
GCGGTTCCGA CTGGTGTGAA GATCTTCTCC TGGATTGCGA CGATGTGGGG CGGCTCGATC
CGCTTCTCCA CGCCGATGGT CTGGGCGATC GGCTTCATCT TCCTGTTCAC GGTCGGCGGC
GTCACCGGTG TTCAGCTCGC CAATGCCGGC CTCGACCGCG CACTGCACGA CACCTATTAC
GTGGTGGCGC ACTTCCATTA CGTGCTCTCG CTCGGCGCCG TTTTCGCGAT CTTTGCGGCC
TGGTACTACT GGTTCCCCAA GATGACCGGC TACATGTATT CGGAGTTTCT CGGCAAGCTG
CACTTCTGGG TGATGTTCGT CGGCGTGAAC CTCATCTTCT TCCCGCAGCA CTTCCTCGGC
CTCGCGGGCA TGCCGCGCCG ATACATTGAT TATCCGGACG CCTTTGCAGG CTGGAATATG
GTATCGTCCT ACGGCTCCTA CATCGCGGCC GTCGGCGTGC TGATCTTTCT CTACTGTGTC
GCCGAAGCTT TCGCGAAGAA GCGCGTTGCA GGGGATAACC CCTGGGGTGA AGGCGCCAAC
ACGCTGGAAT GGCAGCTGTC CTCGCCGCCG CCGTTCCACC AGTGGGAGCA GCTCCCGCGG
ATCAAGTGA
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| Protein sequence | MAGTAVHHDQ RHDHSDHGHA EHAHKPLTFF QRWFLSTNHK DIGTLYLIFA IIAGIIGGTL
SVFMRAELQE PGIQIFHGLA QMVYGFEGDA AIDGGKHMFN VFTTAHALIM IFFMVMPALI
GGFANWMVPI MIGAPDMAFP RMNNISFWLI VPAFLLVLLS MFVEGPAGAY GAGGGWTIYP
PFSTSGMPGP AMDLAILGLH IAGASSILGA INFITTILNM RAPGMTLHKM PLFAWSVLIT
AFLLLLSLPV LAGAITMLLT DRNFGTTFFS PEGGGDPILF QHLFWFFGHP EVYILILPGF
GIVSHIISTF SRKPIFGYLG MAYAMVAIGA VGFIVWAHHM YTVGMSLQTQ RYFVFATMVI
AVPTGVKIFS WIATMWGGSI RFSTPMVWAI GFIFLFTVGG VTGVQLANAG LDRALHDTYY
VVAHFHYVLS LGAVFAIFAA WYYWFPKMTG YMYSEFLGKL HFWVMFVGVN LIFFPQHFLG
LAGMPRRYID YPDAFAGWNM VSSYGSYIAA VGVLIFLYCV AEAFAKKRVA GDNPWGEGAN
TLEWQLSSPP PFHQWEQLPR IK
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