Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0493 |
Symbol | |
ID | 5321327 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 538133 |
End bp | 539056 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640789428 |
Product | pirin domain-containing protein |
Protein accession | YP_001326185 |
Protein GI | 150395718 |
COG category | [R] General function prediction only |
COG ID | [COG1741] Pirin-related protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCTTCT TTCCTGGTCC CGATCCGCTT GCGGGGGACA AGCCCGCCTG CGACGCTATC GAGCATCTGA TCATTCCGCG TACCAGCGAT ATCGGCGGGC TGCAGGTCAG ACGCGCGCTG CCCACGGCGA GACGCCGCCT CGTCGGCCCA TTCATTTTCT TCGACCGGAT GGGACCGGCG CTGTTGCGTG CGGGCGAGGC GATCGACGTC CGCCCGCATC CACATATCGG TCTTTCGACC GTTACCTATC TCTTCGACGG CGAGATCAAG CACCGCGACA GCCTCGGCAC CGAAATGGTC ATCCGCCCGG GTGATGTGAA CCTGATGACG GCCGGGCGCG GTATCGTGCA TTCGGAGCGC TCGCCGGAGA ACCAGCGCGG TCACGAGCGC TCGCTTTCAG GACTGCAGAC CTGGCTGGCG CTTCCCGATT CCATGGAGGA GATCAATCCG GTTTTCGCGC ATACGGAGGA ACGCATGCTG CCGCATCTTA CCGATGGCGG CGTGCGCGCA CGCGTCGTCA TCGGGCAGTT CGAAGGCGCG GCCTCACCGG TCTCCACCTT CACAGACACG ATCTATGTCG ATCTGAAGAT CGAGCCAGGG AAGAGCGCGC CTTTCGCGGC CAGTTGGGAA GAGCGGGCGC TCTACATTCT CTCCGGCGAA GCGATCATCG CCGGAGATCA TTTCGCCGAT AATCAGCTCC TCGTCTTTCG TCCCGGCGAC CAAATCACCA TCACTGCAGG GCCCGCAGGC TGTCACGTCA TGCTGTTCGG TGGCACGGCG CTCGGCTCGG CGCGTCATAT CTGGTGGAAC TTCGTTTCTT CCTCCAAGGA GAGGATCGAC AAGGCGAAGG AAGAATGGCG CACCGGGCGC TTCGATATCG TGCCGGGGGA TGAGGAGGAA TTCATACCTC TGCCGGCAAG CTGA
|
Protein sequence | MSFFPGPDPL AGDKPACDAI EHLIIPRTSD IGGLQVRRAL PTARRRLVGP FIFFDRMGPA LLRAGEAIDV RPHPHIGLST VTYLFDGEIK HRDSLGTEMV IRPGDVNLMT AGRGIVHSER SPENQRGHER SLSGLQTWLA LPDSMEEINP VFAHTEERML PHLTDGGVRA RVVIGQFEGA ASPVSTFTDT IYVDLKIEPG KSAPFAASWE ERALYILSGE AIIAGDHFAD NQLLVFRPGD QITITAGPAG CHVMLFGGTA LGSARHIWWN FVSSSKERID KAKEEWRTGR FDIVPGDEEE FIPLPAS
|
| |