Gene Smed_0483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0483 
Symbol 
ID5321317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp524224 
End bp525468 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content60% 
IMG OID640789418 
ProductRieske (2Fe-2S) domain-containing protein 
Protein accessionYP_001326175 
Protein GI150395708 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATTC AGACCGAAAT GCTACGCAAG CTGAAGACCC GTCGCGAAGG CTACAGCCTC 
GACCGCGCCT TCTACGTCGA TCCCGGCTAT TACCGTCAGG ATCTGGAGCA AATCTGGTAC
AGGGACTGGT TGTTCATCGG GCATGATTGC GAAATTCCGC GCCCGGGGAA CTATTTCACC
GTGCAGGTGG GGGAGTACCC CGTAGTGCTC GTGCGCGACC GCCAGGGCGC TATTCGTGCT
TTGCACAATT CGTGCCGTCA CCGCGGCTCC CGCGTCTGCA CGCAGCACAG AGGTTCATCC
GCCAAACTCG TTTGTCCCTA CCACCAATGG ACCTACGAGC TCGACGGCCG GCTGCTCTTT
GCGCGACAGA TGCCCGAGGG ATTCGATCCG GCCGAACACA GTCTGAAGGC CATCCACTGC
GAGACGGTCG GCGGCTACAT CTTCATCAGT CTTGCCGATG AACCGGTGGA CTTCCGGCAG
TTCCGCGAAA CGGTCGCGGC CTATCTCGCG CCCCATCGCC TTGGGGAGAC CAAGGTCGCC
TTCGAGAGCA CCATTGTCGA GAAAGGCAAC TGGAAGCTCG TCTGGGAGAA CAATCGGGAG
TGCTATCACT GTGCCGCCAA TCACCCGGAG CTCTGCCGCA CCTATCCGGA GGCGCCGACA
GTGACCGGCG TTCAGGGAGC GATGGATGAC CCCGAAATCG GTGCCCATTG GCGCAAATGC
GAGAATGCGG GCCTTCCCAG TGCCTTCAGG ATCGCGCCAA CCGGCCAGTT TCGCATGACC
AGAATGCCGC TGATCAACGG AGCCGAGAGT TATACGATGT CGGGGCAAAG CGCCGTGCTC
AAGCCACTTT CCCCGCAGGT GAATGCCAGC GGCATCGGCA CTCTGCTTCT CTTCCATTAT
CCCACCACCT GGAACCATAT CCTCGGTGAT CACGCGATCA CCTTTCGCGT GCTGCCGCTC
GGTCCGGAAT TGACTGAGGT TACGACCAAG TGGCTCGTCA ACAAGGAGGC GGTCGAGGGC
GTCGACTATA CCATCGAGGA TCTGACGCAT GTCTGGACGG AAACCAACGA CCAGGACCGG
CAGATCGTCG AGGAAAACGC CTTCGGCATC CGTTCTCCGG CCTATGAACC AGGCCCCTAT
TCGGCCGAGC ACGAGGGCGG CGTCATGCAG TTCGTCGAGT GGTATTCGAG TTTCATGCTG
GACCGCCTTC AGGGCGGAGC CACGCATCTT TCGCGGGTCG CATGA
 
Protein sequence
MEIQTEMLRK LKTRREGYSL DRAFYVDPGY YRQDLEQIWY RDWLFIGHDC EIPRPGNYFT 
VQVGEYPVVL VRDRQGAIRA LHNSCRHRGS RVCTQHRGSS AKLVCPYHQW TYELDGRLLF
ARQMPEGFDP AEHSLKAIHC ETVGGYIFIS LADEPVDFRQ FRETVAAYLA PHRLGETKVA
FESTIVEKGN WKLVWENNRE CYHCAANHPE LCRTYPEAPT VTGVQGAMDD PEIGAHWRKC
ENAGLPSAFR IAPTGQFRMT RMPLINGAES YTMSGQSAVL KPLSPQVNAS GIGTLLLFHY
PTTWNHILGD HAITFRVLPL GPELTEVTTK WLVNKEAVEG VDYTIEDLTH VWTETNDQDR
QIVEENAFGI RSPAYEPGPY SAEHEGGVMQ FVEWYSSFML DRLQGGATHL SRVA