Gene Smed_0469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0469 
Symbol 
ID5321303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp506391 
End bp506816 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content62% 
IMG OID640789404 
ProductPilT domain-containing protein 
Protein accessionYP_001326161 
Protein GI150395694 
COG category[R] General function prediction only 
COG ID[COG1487] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGTTC TCGATACCAA CGTGATCTCC GAACTGTGGA GGATCGAGCC GGATTCCAAC 
GTGCTGACCT GGATCGACGC GCAGATGGTG GAAACCCTCT ACCTGTCCAC GATCACGGTA
GCCGAACTGC GCTTCGGTTT AGCGGCCATG CCCGCAGGCA CGCGTCGAAC GATCTATTTG
GATCGGTTGG AGCGAGAGGT CTTGCCGGCC TTTTCCGGGC GTGTCCTGCC CTTCGATCTG
GGCGCCTCAC AGGCCTATGC TAACCTGATG GCGCGGGTGA AAATGGCTGG CAGGGGCATC
GGAAAGGCGG ACGGCTACAT CGCCGCGACG GCGGCATCAC GCGGCCTGAT GGTTGCCACT
CGAGATGTCA GTCCATTCGA GGCGGCAGGA CTGACCGTCC TTAACCCCTG GCGCGCCGCG
CGATGA
 
Protein sequence
MIVLDTNVIS ELWRIEPDSN VLTWIDAQMV ETLYLSTITV AELRFGLAAM PAGTRRTIYL 
DRLEREVLPA FSGRVLPFDL GASQAYANLM ARVKMAGRGI GKADGYIAAT AASRGLMVAT
RDVSPFEAAG LTVLNPWRAA R