Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0469 |
Symbol | |
ID | 5321303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 506391 |
End bp | 506816 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640789404 |
Product | PilT domain-containing protein |
Protein accession | YP_001326161 |
Protein GI | 150395694 |
COG category | [R] General function prediction only |
COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCGTTC TCGATACCAA CGTGATCTCC GAACTGTGGA GGATCGAGCC GGATTCCAAC GTGCTGACCT GGATCGACGC GCAGATGGTG GAAACCCTCT ACCTGTCCAC GATCACGGTA GCCGAACTGC GCTTCGGTTT AGCGGCCATG CCCGCAGGCA CGCGTCGAAC GATCTATTTG GATCGGTTGG AGCGAGAGGT CTTGCCGGCC TTTTCCGGGC GTGTCCTGCC CTTCGATCTG GGCGCCTCAC AGGCCTATGC TAACCTGATG GCGCGGGTGA AAATGGCTGG CAGGGGCATC GGAAAGGCGG ACGGCTACAT CGCCGCGACG GCGGCATCAC GCGGCCTGAT GGTTGCCACT CGAGATGTCA GTCCATTCGA GGCGGCAGGA CTGACCGTCC TTAACCCCTG GCGCGCCGCG CGATGA
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Protein sequence | MIVLDTNVIS ELWRIEPDSN VLTWIDAQMV ETLYLSTITV AELRFGLAAM PAGTRRTIYL DRLEREVLPA FSGRVLPFDL GASQAYANLM ARVKMAGRGI GKADGYIAAT AASRGLMVAT RDVSPFEAAG LTVLNPWRAA R
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