Gene Smed_0446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0446 
Symbol 
ID5321280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp484789 
End bp485148 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content65% 
IMG OID640789381 
Productputative FOF1 ATP synthase, subunit I transmembrane protein 
Protein accessionYP_001326138 
Protein GI150395671 
COG category[S] Function unknown 
COG ID[COG5336] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.912309 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.120038 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGAAG AGCCGGAAGA AAGTCTGGAA GCGCGGCTCA AGCGCCTCGG CGAAGACATC 
AAGTCCAAGC GGCCCGATGT CTCGGATGGG GTGGAGCGTC GCGCCGAGGA GAGCCGCAAG
GGCTACGCGG CGGCGATGAA GCTCTCGAGC GAATTCATCG CCGGCATCGT GGTCGGGGCG
TTTCTGGGCT ATCTTTTGGA CCACTTTGCG GGTACAGGGC CGTGGGGCAT GATCGTGCTC
CTGCTTCTCG GCTTCTGTGC CGGTGTGTTG AACGTGCTGC GTTCCGCCGG TGTGGTGGCG
ACCACCGACC AGCGGAAAGG CGGGCCCGGC ACGGATAAGA AGGACGGCGA CGGCGCCTGA
 
Protein sequence
MTEEPEESLE ARLKRLGEDI KSKRPDVSDG VERRAEESRK GYAAAMKLSS EFIAGIVVGA 
FLGYLLDHFA GTGPWGMIVL LLLGFCAGVL NVLRSAGVVA TTDQRKGGPG TDKKDGDGA