Gene Smed_0437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0437 
Symbol 
ID5321271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp473726 
End bp474646 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content67% 
IMG OID640789372 
Product2-keto-3-deoxy-galactonokinase 
Protein accessionYP_001326129 
Protein GI150395662 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3734] 2-keto-3-deoxy-galactonokinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.282001 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGACGG CAGGCTATTA TGCCGCAGTG GATTGGGGGA CATCGAGCTT CCGCCTGTGG 
ATCATCGGAG AGGACGGCGC CGTGCTCGCC GAGCGCCGCA GCTCCGAGGG CATGACGACG
GCTGCAAAGA CGGGATTTCA TACCGTTCTC GACAGCCACC TTGCCGCCGT TTCCGCGCTC
CCACATCTGC CCGTCATCAT CTGCGGCATG GCGGGCGCCC GGCAGGGCTG GAAGGAGGCC
GGGTATATTG AAACCCCGGC AGCACTCTCG GCCATTGCCG GCCGGGCCAT GACCGTTCCC
GATGTCGATC GCGACATCCG GATCCTCCCG GGCCTGGCCC AACGCGGCAA ACAGCGTCCG
GACGTGATGC GCGGCGAGGA GACCCAGCTT CTCGGCGCCG CTGCGCTCAT CGGCGGCGGC
CGGCAGCTCG TCTGCATGCC CGGCACCCAC AGCAAATGGG TTCGCCTCGC CGGCGATAAG
GTGGAAGGCT TCTCCACCTT CATGACAGGC GAACTCTTCG ATGCTCTCTC GCGCCACACG
ATCCTCAGCC ACGCGGTTGC GGAAGCGGAG ACATTCGCGG CCGGGAGTGC CGCTTTCGCG
GATGCCGTGA GCCGCGCGAC GGAAAGCCCG GCGACCGCCA CGAATCTGCT TTTCTCCGTT
CGTGCCGGCC AGCTGCTGCA CGGCACCGGC GCCGCCGATG CGAGGGCGCA GCTCTCCGGC
ACGCTGATCG GCCTCGAGAT CGCTGGCGCA CTCGCGGGGT CTCCTCAATC GGAAGACGTC
TGCCTCGTTG GCGCCGGCAA GCTCGGCACG CTTTATCGTA CTGCCCTCGA AAGCCAGGGC
CTCAACGTTC AGGTCGTCGA CGCCGATGAG GCGGTGCGGG GCGGTCTATC CGCTGCCGCC
CGGGCGATTT GGCCTCTATG A
 
Protein sequence
MTTAGYYAAV DWGTSSFRLW IIGEDGAVLA ERRSSEGMTT AAKTGFHTVL DSHLAAVSAL 
PHLPVIICGM AGARQGWKEA GYIETPAALS AIAGRAMTVP DVDRDIRILP GLAQRGKQRP
DVMRGEETQL LGAAALIGGG RQLVCMPGTH SKWVRLAGDK VEGFSTFMTG ELFDALSRHT
ILSHAVAEAE TFAAGSAAFA DAVSRATESP ATATNLLFSV RAGQLLHGTG AADARAQLSG
TLIGLEIAGA LAGSPQSEDV CLVGAGKLGT LYRTALESQG LNVQVVDADE AVRGGLSAAA
RAIWPL