Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0437 |
Symbol | |
ID | 5321271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 473726 |
End bp | 474646 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640789372 |
Product | 2-keto-3-deoxy-galactonokinase |
Protein accession | YP_001326129 |
Protein GI | 150395662 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3734] 2-keto-3-deoxy-galactonokinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.282001 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGACGACGG CAGGCTATTA TGCCGCAGTG GATTGGGGGA CATCGAGCTT CCGCCTGTGG ATCATCGGAG AGGACGGCGC CGTGCTCGCC GAGCGCCGCA GCTCCGAGGG CATGACGACG GCTGCAAAGA CGGGATTTCA TACCGTTCTC GACAGCCACC TTGCCGCCGT TTCCGCGCTC CCACATCTGC CCGTCATCAT CTGCGGCATG GCGGGCGCCC GGCAGGGCTG GAAGGAGGCC GGGTATATTG AAACCCCGGC AGCACTCTCG GCCATTGCCG GCCGGGCCAT GACCGTTCCC GATGTCGATC GCGACATCCG GATCCTCCCG GGCCTGGCCC AACGCGGCAA ACAGCGTCCG GACGTGATGC GCGGCGAGGA GACCCAGCTT CTCGGCGCCG CTGCGCTCAT CGGCGGCGGC CGGCAGCTCG TCTGCATGCC CGGCACCCAC AGCAAATGGG TTCGCCTCGC CGGCGATAAG GTGGAAGGCT TCTCCACCTT CATGACAGGC GAACTCTTCG ATGCTCTCTC GCGCCACACG ATCCTCAGCC ACGCGGTTGC GGAAGCGGAG ACATTCGCGG CCGGGAGTGC CGCTTTCGCG GATGCCGTGA GCCGCGCGAC GGAAAGCCCG GCGACCGCCA CGAATCTGCT TTTCTCCGTT CGTGCCGGCC AGCTGCTGCA CGGCACCGGC GCCGCCGATG CGAGGGCGCA GCTCTCCGGC ACGCTGATCG GCCTCGAGAT CGCTGGCGCA CTCGCGGGGT CTCCTCAATC GGAAGACGTC TGCCTCGTTG GCGCCGGCAA GCTCGGCACG CTTTATCGTA CTGCCCTCGA AAGCCAGGGC CTCAACGTTC AGGTCGTCGA CGCCGATGAG GCGGTGCGGG GCGGTCTATC CGCTGCCGCC CGGGCGATTT GGCCTCTATG A
|
Protein sequence | MTTAGYYAAV DWGTSSFRLW IIGEDGAVLA ERRSSEGMTT AAKTGFHTVL DSHLAAVSAL PHLPVIICGM AGARQGWKEA GYIETPAALS AIAGRAMTVP DVDRDIRILP GLAQRGKQRP DVMRGEETQL LGAAALIGGG RQLVCMPGTH SKWVRLAGDK VEGFSTFMTG ELFDALSRHT ILSHAVAEAE TFAAGSAAFA DAVSRATESP ATATNLLFSV RAGQLLHGTG AADARAQLSG TLIGLEIAGA LAGSPQSEDV CLVGAGKLGT LYRTALESQG LNVQVVDADE AVRGGLSAAA RAIWPL
|
| |