| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0394 |
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| Symbol | |
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| ID | 5321228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 422685 |
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| End bp | 424124 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640789329 |
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| Product | D-lactate dehydrogenase (cytochrome) |
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| Protein accession | YP_001326086 |
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| Protein GI | 150395619 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0534989 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.413776 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGAGA CGATAGGCTT TCTGAAGCCC AGGCAGGCTG TTCTCGATCG TCGGCGGGAA
ATCGTCGCCG ACCTCGGTGA TCTGCTTCCG GAAGGTTGCC TCATCAGCGA CGAACGTGGC
CTCAAGCCAT TCGAGACGGA TGCATTTATC GCCTACCGGC GGATGCCGCT CGCGGTCGTT
CTCCCCGAGA CGACGGAACA GGTGGCCACG GTCCTCAAAT ACTGTAGCCG CTACGGTATT
CCAATTGTCC CGAGGGGTGC CGGCACCTCC CTCTCCGGCG GGGCCATTCC TCAGGAAGAC
GCGATCGTCG TCGGCCTGTC GAAGATGGCG CGCATCCTCG ATATCGACCT CTTCAACCGG
ACGGCGACGG TTCAGGCGGG CGTGACCAAT CTCAACATTT CCGACGCGGT TTCGGCCGAT
GGATTCTTCT ATGCGCCGGA TCCGAGTTCG CAGCTCGCCT GCACCATCGG CGGGAATATC
GGGATGAATT CCGGTGGCGC GCACTGTCTG AAATACGGGG TGACCACAAA CAACCTTCTT
GGCGTCAAGA TGGTGCTTTT CGACGGCACC GTGATCGAAC TTGGTGGCAA GGCGCTCGAC
GCCTCGGGAT ATGACTTGCT TGGCCTTATC TGTGGTTCCG AGGGGCAGCT TGGTATCGTT
ACGGAAGCGA CGGTGCGGCT GATTGCCAAG GCCGAAGGCG CGCGCCCCGT TCTTTTCGGA
TTTGCCACTT CAGAATCCGC CGGGAGCTGC GTCGCCGATA TCATCGGATC GGGCATCATT
CCGGTTGCGA TCGAATTCAT GGACAAACCG GCAATCGAAA TCTGCGAAGC CTTCGCGCAT
GCGGGGTACC CGCTCGACGT CGAAGCATTG CTGATCGTCG AAGTGGAAGG TTCCGAGGCT
GAAATGGATT CGATGCTCGC AGGCATCATC GGGATTGCCC GCCGCCACGG TGTGATGACG
ATCAAGGAAT CGCAATCGGC GCTCGAAGCG GCACTGATCT GGAAGGGGCG GAAATCGGCC
TTCGGCGCTA CCGGCCGGAT TGCCGATTAT ATCTGCATGG ACGGAACGGT GCCGCTGAGC
CAGCTCTCCC ATGTCCTGCG CCGGACCGGC GAGATCGTCG CCGGCTATGG CCTGCGCGTT
GCCAATGTCT TCCATGCAGG TGACGGCAAC ATGCATCCGC TGATCCTCTA CAATATCAAC
GATCCGGATG AAGCGGCCCG GGCGGAAGAG GCGGGCAACG ACATTCTGAA GCTCTGCGTC
GAGGCAGGCG GCTGCCTCAC CGGGGAACAC GGGGTCGGCA TCGAGAAACG TGACCTGATG
CTGTTTCAGT ACAGCAAGGC CGATCTCGAC CAGCAGATGG GCGCGCGTGC TGCCTTCGAT
CCGCAATGGC TCCTGAACCC GTCGAAGGTC TTCCCGCTCG AAGGGCGGCC CGCGGCATGA
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| Protein sequence | MPETIGFLKP RQAVLDRRRE IVADLGDLLP EGCLISDERG LKPFETDAFI AYRRMPLAVV
LPETTEQVAT VLKYCSRYGI PIVPRGAGTS LSGGAIPQED AIVVGLSKMA RILDIDLFNR
TATVQAGVTN LNISDAVSAD GFFYAPDPSS QLACTIGGNI GMNSGGAHCL KYGVTTNNLL
GVKMVLFDGT VIELGGKALD ASGYDLLGLI CGSEGQLGIV TEATVRLIAK AEGARPVLFG
FATSESAGSC VADIIGSGII PVAIEFMDKP AIEICEAFAH AGYPLDVEAL LIVEVEGSEA
EMDSMLAGII GIARRHGVMT IKESQSALEA ALIWKGRKSA FGATGRIADY ICMDGTVPLS
QLSHVLRRTG EIVAGYGLRV ANVFHAGDGN MHPLILYNIN DPDEAARAEE AGNDILKLCV
EAGGCLTGEH GVGIEKRDLM LFQYSKADLD QQMGARAAFD PQWLLNPSKV FPLEGRPAA
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