Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0391 |
Symbol | |
ID | 5321225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 419392 |
End bp | 420249 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640789326 |
Product | GntR domain-containing protein |
Protein accession | YP_001326083 |
Protein GI | 150395616 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.35489 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.643361 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCGCGTG GAAGCGGATG CGGGCGCACC CTGAGCATTA TGCCCGGCGC TTCGGGAGAT ATGGCCGTGA CCGAAGACCA GGACGACCTC TACGCCCGCA TCAGCCACAG CCGGACGGCA GACGAGGTCG TGCAGCAGAT CGAACTTCTG ATCCTGGAGG GCATTTTGCG CGATGGCGAC CGCTTGCCGG GCGAGCGGGA CCTCTCCCGA CGGTTCGAGG TGTCGCGCCC CATCCTTCGC GAGGCACTGA AAGAGCTCGA GGCGCGCGGC CTCGTCGAGA GCCGGCATGG CGGCGGCACA TTCGTCGCCG ACGTGGTCGG CCAGATCTTT TCCAAACCCC TGATCGAGCT CATCGGGCGC CATCACAAGG CCACGCAGGA CTATCTCGAA TTCCGGCGTG AACTCGAGGG CCTGACGGCG GAACTTGCGG CGACCCGCGC AACCGACTTC GACCGCGACA TCCTGACCCG CGTCATCGAG CGCATGCGCG CCGCGCATGC GAGCGGCAGC TTCGACGACG AGCTCGAAGC CGATATCGAG CTGCACAACG CTATCGGCGA AAGCGCTCAC AATATCATTC TGCTCCACAC GCTCCGGGCT TGTTACAGGC TTCTCACCCG GGGGATCTTC TTCCACCGAA GTGCCGTCTT CGGCGCCCCC GGCGCACGCG CGCTACTGCT TGCACAACAC GAGGCGATCT ACGCCGCCGT TATGGCTCGC GACCCGGTGG CAGCCAAGAT GGCCGCGCAG GACCACATCG ATTTCGTCGC AGCCGCGGCG CAGGAGGTGG AGCGCAACGG CGAATGGTCC CGCATAGCGC GTCTGCGCCT TCAGCAGCGC GACCGTTCCG GCGCTTGA
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Protein sequence | MPRGSGCGRT LSIMPGASGD MAVTEDQDDL YARISHSRTA DEVVQQIELL ILEGILRDGD RLPGERDLSR RFEVSRPILR EALKELEARG LVESRHGGGT FVADVVGQIF SKPLIELIGR HHKATQDYLE FRRELEGLTA ELAATRATDF DRDILTRVIE RMRAAHASGS FDDELEADIE LHNAIGESAH NIILLHTLRA CYRLLTRGIF FHRSAVFGAP GARALLLAQH EAIYAAVMAR DPVAAKMAAQ DHIDFVAAAA QEVERNGEWS RIARLRLQQR DRSGA
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