| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0384 |
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| Symbol | |
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| ID | 5321218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 411903 |
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| End bp | 412853 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640789319 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001326076 |
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| Protein GI | 150395609 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCAC CGCTCGATAT TGACCAGCTG CAAACCTTCG TAGCAATCGC AGATACGGGC
AGCTTCACGA AGGCGGCCGA CCGAGTCTTC AAGACTCAAT CCGCCGTGTC GATGCAGATG
CGCCGCCTGG AAGAGCGGAT CGGCAAGCCG CTTTTCATGA AGGACGGCCG GGGCAACCGG
CTGACCGTCG AGGGTGACAG GCTCCTCAAC TTCGCCCGGA GGATGATTCG CCTCAACAAC
GAGGCGATTG CCTCCTTCGA CGACAACCGA CTCGAGGGAA CGCTGCGGAT CGGCACGCCG
GACGACTACG CGGACCGCTA CATGCCGGAG ATCATCGTCC GCTTCGCCAA GACACATCCG
AATGTCGAAC TCTACATCGT ATGCGAGCCT TCGGTCGACC TCGCCGAAAA GCTGGCGAAG
GGCGACCTCG ATATCGCGCT CGTCACGCAC AATCCGCGCG CGCGTGCCTC GGACGTCGTC
CGCACCGAGC CGCTCTGCTG GGTGAGCTCC ATCAACCATC CGCTGCCCGA GAACGCGCCG
ATCCCGCTCG CGGTCGGCCG GCGCGACTGT CAGTGGAGGC AGGCTGCCTG CGCGGCACTC
GACGCGACGG GCAAGGAATA TCAGATCCTG TTCACAAGCT GGTCGTCGAC GGTGGTTGCG
GCCGCGGTGC TGGCCGGCAT GGCGGTTTCC GTACTTCCGG AATCGGCGCT GCGCCCGGGT
ATGAAAGTGC TGACGCTGGC GGACGGCTTT CCGGCACTGG CGCCGGTTCA GATCGGCATC
ATGAAGCGCC CGGGCCTGTC GCCTTCGCTG TCGAATGCGA TTACCAACCA CATTTGCGCC
TGCCTGGACA ACATCACGCC GATCACAGTC AATGATGACC TCGAAGGCGA TCTCAAGAGC
TATCCGCGTT ATCCGCGCCT GAGACAGAGC CATATGCTGC CGGGCTGGTG A
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| Protein sequence | MSAPLDIDQL QTFVAIADTG SFTKAADRVF KTQSAVSMQM RRLEERIGKP LFMKDGRGNR
LTVEGDRLLN FARRMIRLNN EAIASFDDNR LEGTLRIGTP DDYADRYMPE IIVRFAKTHP
NVELYIVCEP SVDLAEKLAK GDLDIALVTH NPRARASDVV RTEPLCWVSS INHPLPENAP
IPLAVGRRDC QWRQAACAAL DATGKEYQIL FTSWSSTVVA AAVLAGMAVS VLPESALRPG
MKVLTLADGF PALAPVQIGI MKRPGLSPSL SNAITNHICA CLDNITPITV NDDLEGDLKS
YPRYPRLRQS HMLPGW
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