| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0330 |
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| Symbol | |
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| ID | 5321163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 360668 |
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| End bp | 361672 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640789265 |
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| Product | nickel-transporting ATPase |
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| Protein accession | YP_001326023 |
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| Protein GI | 150395556 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0802428 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCGAT TCTTTCTGGG GCGCTTGGCA GTGCTGATCC CGACCTTCAT CGGGGTTTCC
ATCATCGCCT TCTCCTTCAT TCGTCTGCTT CCCGGCGACC CGGTGGCGCT GCTTTCCGGT
GAACGGGTGA TGTCGCCGGA GCGGCACGCC GAAATTTCTC GCCAGCTGGG CTTCGACCGC
CCGATCGTCA TGCAGTACCT GGATTATCTC TGGGGCGTTC TGCAGGGCGA TTTCGGCACG
TCGATCGTCA CCAAGAGGCC GGTGATGGAT CAGTTCCTGG AGCTCTTCCC GGCAACCGTC
GAACTGTCGC TCTGCGCCAT CATTTTCGCC GTCCTTGTCG GTATTCCCGC CGGTGTCGTC
GCGGCGGTCA AGCGCGGGTC CATCTTCGAC CAGATCATCA TGGGCACCGC GCTCGTCGGC
TTCTCGATGC CGATTTTCTG GTGGGGCCTG CTGCTGATCA TGCTTGTCTC CGGTACGCTG
CAATGGACGC CGGTGTCCGG CCGGATTTCG CTGATGTTCT ACTTCCCCTC AGTCACCGGC
TTCATGCTGA TCGACTCGCT TTTGTCGGGA CAGGAAGGTG CGTTCCGGTC GGCCCTCCAC
CACCTTATTC TGCCGACGAT CGTACTCGGC ACCATTCCGC TCGCCGTCAT CGCGCGCCAG
ACCCGCTCGG CAATGCTCGA GGTACTTTCC GAGGACTATG TCCGCACCGC GCGCGCCAAA
GGGCTCTCCA CCTTCCGGGT GGTCGGCATC CACGCGCTGC GCAATGCGAT GATCCCCGTC
GTCACCACCA TCGGCCTGCA GATCGGCGTG ATGCTGGCGG GCGCGATCCT GACGGAGACG
ATCTTCTCCT GGCCGGGGAT CGGCAAATGG CTGCTCGATT CGGTGTCCCG GCGCGACTAT
GCCGTCATCC AGGGCGGGCT TCTGATCATC GCCGCGGTGA TCATGCTGGT GAACCTCGCC
GTGGATCTGC TCTACGGCCT GATCAATCCG CGCATCCGGC ACTGA
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| Protein sequence | MFRFFLGRLA VLIPTFIGVS IIAFSFIRLL PGDPVALLSG ERVMSPERHA EISRQLGFDR
PIVMQYLDYL WGVLQGDFGT SIVTKRPVMD QFLELFPATV ELSLCAIIFA VLVGIPAGVV
AAVKRGSIFD QIIMGTALVG FSMPIFWWGL LLIMLVSGTL QWTPVSGRIS LMFYFPSVTG
FMLIDSLLSG QEGAFRSALH HLILPTIVLG TIPLAVIARQ TRSAMLEVLS EDYVRTARAK
GLSTFRVVGI HALRNAMIPV VTTIGLQIGV MLAGAILTET IFSWPGIGKW LLDSVSRRDY
AVIQGGLLII AAVIMLVNLA VDLLYGLINP RIRH
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