Gene Smed_0322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0322 
Symbol 
ID5321155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp350614 
End bp351852 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content60% 
IMG OID640789257 
ProductFAD-linked oxidoreductase 
Protein accessionYP_001326015 
Protein GI150395548 
COG category[C] Energy production and conversion 
COG ID[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID[TIGR01679] FAD-linked oxidoreductase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.34325 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTCG AGAAAGGTGG AGTCTGGCGG AACTGGGTGG GCAATCAGTA CTGCGTGTCG 
CAGTACAAGG CGGCGCCGGA AACCGAGGCG GAGCTGGCCG AGCTGGTCGC AGAAGCGGAC
AAGCGCGATC TCGGCGTACG CGTCTCCGGT TCGGGGCACT CCTTCACGCC GGTCGTCGGG
ACCAGTGGTC TCCTGTTGTC GCTCGAAAAT CTCAGGGGCG TTCAGAACGT CGACAAGGAA
CGCAGGCAAA TTACGGTCGC GGGCGGAACG CGCATCAATG AAGTCGGCAA GACTCTCAAG
CAGCACGGCC TCTCGCTGAT CAATCAGGGC GATATCGACA GCCAGGCGGT GGCCGGCGCA
TTCACCACCG GAACCCACGG CACCGGGATC AAGCTCGGGA ACATGGCGTC TTCGATCGCC
GGAATGCGGA TCGTCAAGGC GAATGGGGAA ATCCTCGACA TCGACGGGAG CGACACGGAG
CTCCTTCACG CCGCCCAGGT TTCGGTGGGT ACGCTCGGTG TCATCTCCTC GATGACCCTC
AACGTCATGG ACGCCTATAA TTTGCACGAG CGGCTCTGGC GGGACGATTT CGAGACCTGC
ATGGAGCGCC ATGACGAACT GGCGGAAAAT CACAGGCATT TCGGATTCTT CTGGTGCCCG
ACGCCGGAAA GCCGCCATCT CTACTGCCTG CCGGATACCG CGGCGGTCTC GTCGACCGAT
AAATTGGCCG ATGTCTGCGA AATGAAGGTG ATGGATATCA CCGACGCGAC ACCGATGGAG
AGCGCGTTCG AAAAGATCGC CTACAGTTCG GAAGTCTATC CGATCGAATA TGTGCCGAAT
TTCGTCGAAC TCGAATATGC GGTTCCCCTA GAGCACGGCA AGGCGGCGGT CCGTGCCGTT
CGCGATCTCA TGCTCAACAA GCATACGAAC TGCATCTATC CCATCGAATA TCGCTTCACC
GCCGGCGATC CGGCTTGGAT GAGCCCGTTC CATCATCAGG ACAGCATCAC GCTCTCCGTC
TCGGGCGGAC CGGGAATCGA TTATTGGGCG TTCCTGAGGG ACGTCGACCA GATCCTGCGC
GGCTACGACT CGCGACCGCA TTGGGGAAAA ATGCATTTCC TCGATACCGA AGACGTGACG
CACCTTTATC CGCGCGCTGG CGATTTCCGC GCGCTGCGGC GGGAACTGGA CCCCAATGGC
CGGTTCCTGA ATGAGCACCT GAAAATGCTG CTCGGCTGA
 
Protein sequence
MAFEKGGVWR NWVGNQYCVS QYKAAPETEA ELAELVAEAD KRDLGVRVSG SGHSFTPVVG 
TSGLLLSLEN LRGVQNVDKE RRQITVAGGT RINEVGKTLK QHGLSLINQG DIDSQAVAGA
FTTGTHGTGI KLGNMASSIA GMRIVKANGE ILDIDGSDTE LLHAAQVSVG TLGVISSMTL
NVMDAYNLHE RLWRDDFETC MERHDELAEN HRHFGFFWCP TPESRHLYCL PDTAAVSSTD
KLADVCEMKV MDITDATPME SAFEKIAYSS EVYPIEYVPN FVELEYAVPL EHGKAAVRAV
RDLMLNKHTN CIYPIEYRFT AGDPAWMSPF HHQDSITLSV SGGPGIDYWA FLRDVDQILR
GYDSRPHWGK MHFLDTEDVT HLYPRAGDFR ALRRELDPNG RFLNEHLKML LG